Gene : Glyma.13G136900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Genomic Order:  1369
Name:  ? Glyma.13G136900 Secondary Identifier:  ? PAC:30502736
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G136900 0.5kb upstream 0.5kb upstream 9294 true Chr13: 24950690-24959983 Glycine max
Glyma.13G136900 0.5kb upstream 0.5kb upstream 500 false Chr13: 24950690-24951189 Glycine max
Glyma.13G136900 0.5kb downstream 0.5kb downstream 9294 true Chr13: 24951190-24960483 Glycine max
Glyma.13G136900 0.5kb downstream 0.5kb downstream 500 false Chr13: 24959984-24960483 Glycine max
Glyma.13G136900 1.0kb upstream 1.0kb upstream 9794 true Chr13: 24950190-24959983 Glycine max
Glyma.13G136900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24950190-24951189 Glycine max
Glyma.13G136900 1.0kb downstream 1.0kb downstream 9794 true Chr13: 24951190-24960983 Glycine max
Glyma.13G136900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24959984-24960983 Glycine max
Glyma.13G136900 2.0kb upstream 2.0kb upstream 10794 true Chr13: 24949190-24959983 Glycine max
Glyma.13G136900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24949190-24951189 Glycine max
Glyma.13G136900 2.0kb downstream 2.0kb downstream 10794 true Chr13: 24951190-24961983 Glycine max
Glyma.13G136900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24959984-24961983 Glycine max
Glyma.13G136900 5.0kb upstream 5.0kb upstream 13794 true Chr13: 24946190-24959983 Glycine max
Glyma.13G136900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24946190-24951189 Glycine max
Glyma.13G136900 5.0kb downstream 5.0kb downstream 13794 true Chr13: 24951190-24964983 Glycine max
Glyma.13G136900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24959984-24964983 Glycine max
Glyma.13G136900 10.0kb upstream 10.0kb upstream 18794 true Chr13: 24941190-24959983 Glycine max
Glyma.13G136900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24941190-24951189 Glycine max
Glyma.13G136900 10.0kb downstream 10.0kb downstream 18794 true Chr13: 24951190-24969983 Glycine max
Glyma.13G136900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24959984-24969983 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301785 5265 Fabidae View MSA
124066546 5270 Rosid View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.92689 0.0 20.2387    
cufflinks 3.693 0.0 11.536   Low
cufflinks 10.1136 0.0 31.6361   High
cufflinks 6.97541 0.0 21.5853    
cufflinks 3.26969 0.0 10.4095   Low
cufflinks 5.56372 0.0 17.389    
cufflinks 7.59213 0.0 26.2365    
cufflinks 4.90047 0.0 15.3061    
cufflinks 6.73385 0.0 22.9614    
cufflinks 1.277        
cufflinks 6.194     High High
cufflinks 2.831        
cufflinks 1.884        
cufflinks 1.214        
cufflinks 7.836     High High
cufflinks 1.603        
cufflinks 1.461        
cufflinks 2.34        
cufflinks 1.605        
cufflinks 1.69        
cufflinks 6.511     High High
cufflinks 1.689        
cufflinks 0.832       Low
cufflinks 4.605       High
cufflinks 1.571        
cufflinks 3.661        

0 Strain