Gene : Glyma.13G138900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  1389
Name:  ? Glyma.13G138900 Secondary Identifier:  ? PAC:30502919
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G138900 0.5kb upstream 0.5kb upstream 4395 true Chr13: 25134950-25139344 Glycine max
Glyma.13G138900 0.5kb upstream 0.5kb upstream 500 false Chr13: 25134950-25135449 Glycine max
Glyma.13G138900 0.5kb downstream 0.5kb downstream 4395 true Chr13: 25135450-25139844 Glycine max
Glyma.13G138900 0.5kb downstream 0.5kb downstream 500 false Chr13: 25139345-25139844 Glycine max
Glyma.13G138900 1.0kb upstream 1.0kb upstream 4895 true Chr13: 25134450-25139344 Glycine max
Glyma.13G138900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25134450-25135449 Glycine max
Glyma.13G138900 1.0kb downstream 1.0kb downstream 4895 true Chr13: 25135450-25140344 Glycine max
Glyma.13G138900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25139345-25140344 Glycine max
Glyma.13G138900 2.0kb upstream 2.0kb upstream 5895 true Chr13: 25133450-25139344 Glycine max
Glyma.13G138900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25133450-25135449 Glycine max
Glyma.13G138900 2.0kb downstream 2.0kb downstream 5895 true Chr13: 25135450-25141344 Glycine max
Glyma.13G138900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25139345-25141344 Glycine max
Glyma.13G138900 5.0kb upstream 5.0kb upstream 8895 true Chr13: 25130450-25139344 Glycine max
Glyma.13G138900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25130450-25135449 Glycine max
Glyma.13G138900 5.0kb downstream 5.0kb downstream 8895 true Chr13: 25135450-25144344 Glycine max
Glyma.13G138900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25139345-25144344 Glycine max
Glyma.13G138900 10.0kb upstream 10.0kb upstream 13895 true Chr13: 25125450-25139344 Glycine max
Glyma.13G138900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25125450-25135449 Glycine max
Glyma.13G138900 10.0kb downstream 10.0kb downstream 13895 true Chr13: 25135450-25149344 Glycine max
Glyma.13G138900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25139345-25149344 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302570 5265 Fabidae View MSA
124061769 5270 Rosid View MSA
123743214 5271 Pentapetalae View MSA
122796614 5272 Eudicot View MSA
122044212 5273 Angiosperm View MSA
121345851 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0153 0.0 48.4974   Low
cufflinks 20.3067 0.0 68.1525 High  
cufflinks 22.1071 0.0 74.095 High  
cufflinks 21.3002 0.0 71.3166 High  
cufflinks 17.7517 0.0 60.1655    
cufflinks 40.3268 0.0 140.692 High High
cufflinks 24.8088 0.0 83.0164 High  
cufflinks 26.8596 0.0 90.0245 High  
cufflinks 20.5898 0.0 69.105 High  
cufflinks 4.119       High
cufflinks 3.446        
cufflinks 2.904       Low
cufflinks 3.389        
cufflinks 3.019       Low
cufflinks 3.05        
cufflinks 3.428        
cufflinks 3.404        
cufflinks 2.861       Low
cufflinks 3.746        
cufflinks 3.417        
cufflinks 4.217       High
cufflinks 3.184        
cufflinks 3.363        
cufflinks 3.522        
cufflinks 3.227        
cufflinks 3.705        

0 Strain