Gene : Glyma.13G121900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15555 - ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED Genomic Order:  1219
Name:  ? Glyma.13G121900 Secondary Identifier:  ? PAC:30504765
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G121900 0.5kb upstream 0.5kb upstream 3102 true Chr13: 23486907-23490008 Glycine max
Glyma.13G121900 0.5kb upstream 0.5kb upstream 500 false Chr13: 23486907-23487406 Glycine max
Glyma.13G121900 0.5kb downstream 0.5kb downstream 3102 true Chr13: 23487407-23490508 Glycine max
Glyma.13G121900 0.5kb downstream 0.5kb downstream 500 false Chr13: 23490009-23490508 Glycine max
Glyma.13G121900 1.0kb upstream 1.0kb upstream 3602 true Chr13: 23486407-23490008 Glycine max
Glyma.13G121900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23486407-23487406 Glycine max
Glyma.13G121900 1.0kb downstream 1.0kb downstream 3602 true Chr13: 23487407-23491008 Glycine max
Glyma.13G121900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23490009-23491008 Glycine max
Glyma.13G121900 2.0kb upstream 2.0kb upstream 4602 true Chr13: 23485407-23490008 Glycine max
Glyma.13G121900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23485407-23487406 Glycine max
Glyma.13G121900 2.0kb downstream 2.0kb downstream 4602 true Chr13: 23487407-23492008 Glycine max
Glyma.13G121900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23490009-23492008 Glycine max
Glyma.13G121900 5.0kb upstream 5.0kb upstream 7602 true Chr13: 23482407-23490008 Glycine max
Glyma.13G121900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23482407-23487406 Glycine max
Glyma.13G121900 5.0kb downstream 5.0kb downstream 7602 true Chr13: 23487407-23495008 Glycine max
Glyma.13G121900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23490009-23495008 Glycine max
Glyma.13G121900 10.0kb upstream 10.0kb upstream 12602 true Chr13: 23477407-23490008 Glycine max
Glyma.13G121900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23477407-23487406 Glycine max
Glyma.13G121900 10.0kb downstream 10.0kb downstream 12602 true Chr13: 23487407-23500008 Glycine max
Glyma.13G121900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23490009-23500008 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306801 5265 Fabidae View MSA
124061111 5270 Rosid View MSA
123740559 5271 Pentapetalae View MSA
122788257 5272 Eudicot View MSA
122044009 5273 Angiosperm View MSA
121344053 5274 Embryophyte View MSA
123425257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26775 0.0 6.78488    
cufflinks 1.33619 0.0 5.3882    
cufflinks 0.643937 0.0 2.90813   Low
cufflinks 1.09317 0.0 6.01526    
cufflinks 1.30518 0.0 7.04054    
cufflinks 2.0552 0.0 9.74346   High
cufflinks 1.22554 0.0 5.21905    
cufflinks 1.3632 0.0 5.45395    
cufflinks 2.01059 0.0 9.51458   High
cufflinks 0.428        
cufflinks 0.476        
cufflinks 0.488        
cufflinks 0.485        
cufflinks 0.528        
cufflinks 0.18       Low
cufflinks 0.403        
cufflinks 0.19       Low
cufflinks 0.568        
cufflinks 0.55        
cufflinks 0.486        
cufflinks 0.388        
cufflinks 0.464        
cufflinks 0.533        
cufflinks 0.511        
cufflinks 0.414        
cufflinks 0.183       Low

0 Strain