Gene : Glyma.13G123500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31189:SF1 - 12S SEED STORAGE PROTEIN CRA1-RELATED Genomic Order:  1235
Name:  ? Glyma.13G123500 Secondary Identifier:  ? PAC:30503482
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G123500 0.5kb upstream 0.5kb upstream 3240 true Chr13: 23665940-23669179 Glycine max
Glyma.13G123500 0.5kb upstream 0.5kb upstream 500 false Chr13: 23668680-23669179 Glycine max
Glyma.13G123500 0.5kb downstream 0.5kb downstream 3240 true Chr13: 23665440-23668679 Glycine max
Glyma.13G123500 0.5kb downstream 0.5kb downstream 500 false Chr13: 23665440-23665939 Glycine max
Glyma.13G123500 1.0kb upstream 1.0kb upstream 3740 true Chr13: 23665940-23669679 Glycine max
Glyma.13G123500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23668680-23669679 Glycine max
Glyma.13G123500 1.0kb downstream 1.0kb downstream 3740 true Chr13: 23664940-23668679 Glycine max
Glyma.13G123500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23664940-23665939 Glycine max
Glyma.13G123500 2.0kb upstream 2.0kb upstream 4740 true Chr13: 23665940-23670679 Glycine max
Glyma.13G123500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23668680-23670679 Glycine max
Glyma.13G123500 2.0kb downstream 2.0kb downstream 4740 true Chr13: 23663940-23668679 Glycine max
Glyma.13G123500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23663940-23665939 Glycine max
Glyma.13G123500 5.0kb upstream 5.0kb upstream 7740 true Chr13: 23665940-23673679 Glycine max
Glyma.13G123500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23668680-23673679 Glycine max
Glyma.13G123500 5.0kb downstream 5.0kb downstream 7740 true Chr13: 23660940-23668679 Glycine max
Glyma.13G123500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23660940-23665939 Glycine max
Glyma.13G123500 10.0kb upstream 10.0kb upstream 12740 true Chr13: 23665940-23678679 Glycine max
Glyma.13G123500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23668680-23678679 Glycine max
Glyma.13G123500 10.0kb downstream 10.0kb downstream 12740 true Chr13: 23655940-23668679 Glycine max
Glyma.13G123500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23655940-23665939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313136 5265 Fabidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0487214 0.0 0.198991 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0102726 0.0 0.0471939 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9833.21 9812.0 9854.42 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.12        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.026        
cufflinks 5.53       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 1.191        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.321        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain