Gene : Glyma.13G170300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING Genomic Order:  1703
Name:  ? Glyma.13G170300 Secondary Identifier:  ? PAC:30501121
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G170300 0.5kb upstream 0.5kb upstream 1818 true Chr13: 28426914-28428731 Glycine max
Glyma.13G170300 0.5kb upstream 0.5kb upstream 500 false Chr13: 28426914-28427413 Glycine max
Glyma.13G170300 0.5kb downstream 0.5kb downstream 1818 true Chr13: 28427414-28429231 Glycine max
Glyma.13G170300 0.5kb downstream 0.5kb downstream 500 false Chr13: 28428732-28429231 Glycine max
Glyma.13G170300 1.0kb upstream 1.0kb upstream 2318 true Chr13: 28426414-28428731 Glycine max
Glyma.13G170300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28426414-28427413 Glycine max
Glyma.13G170300 1.0kb downstream 1.0kb downstream 2318 true Chr13: 28427414-28429731 Glycine max
Glyma.13G170300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28428732-28429731 Glycine max
Glyma.13G170300 2.0kb upstream 2.0kb upstream 3318 true Chr13: 28425414-28428731 Glycine max
Glyma.13G170300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28425414-28427413 Glycine max
Glyma.13G170300 2.0kb downstream 2.0kb downstream 3318 true Chr13: 28427414-28430731 Glycine max
Glyma.13G170300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28428732-28430731 Glycine max
Glyma.13G170300 5.0kb upstream 5.0kb upstream 6318 true Chr13: 28422414-28428731 Glycine max
Glyma.13G170300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28422414-28427413 Glycine max
Glyma.13G170300 5.0kb downstream 5.0kb downstream 6318 true Chr13: 28427414-28433731 Glycine max
Glyma.13G170300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28428732-28433731 Glycine max
Glyma.13G170300 10.0kb upstream 10.0kb upstream 11318 true Chr13: 28417414-28428731 Glycine max
Glyma.13G170300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28417414-28427413 Glycine max
Glyma.13G170300 10.0kb downstream 10.0kb downstream 11318 true Chr13: 28427414-28438731 Glycine max
Glyma.13G170300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28428732-28438731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310591 5265 Fabidae View MSA
124074887 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.714573 0.0 2.63973    
cufflinks 0.249167 0.0 0.964948   Low
cufflinks 0.168567 0.0 0.662144 Low Low
cufflinks 0.638038 0.0 2.36935    
cufflinks 1.74255 0.0 6.07057    
cufflinks 0.647347 0.0 2.40313    
cufflinks 3.68568 0.0 11.7545    
cufflinks 7.08483 0.0 20.4788   High
cufflinks 4.69058 0.0 14.349   High
cufflinks 0.62        
cufflinks 0.59        
cufflinks 0.07     Low Low
cufflinks 3.476       High
cufflinks 0.189        
cufflinks 0.228        
cufflinks 0.41        
cufflinks 1.175       High
cufflinks 0.054     Low Low
cufflinks 0.145        
cufflinks 0.491        
cufflinks 0.702        
cufflinks 0.715        
cufflinks 0.205        
cufflinks 1.034        
cufflinks 0.426        
cufflinks 0.375        

0 Strain