Gene : Glyma.13G174400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23308:SF34 - F16B3.3 PROTEIN Genomic Order:  1744
Name:  ? Glyma.13G174400 Secondary Identifier:  ? PAC:30502302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G174400 0.5kb upstream 0.5kb upstream 2946 true Chr13: 28860527-28863472 Glycine max
Glyma.13G174400 0.5kb upstream 0.5kb upstream 500 false Chr13: 28862973-28863472 Glycine max
Glyma.13G174400 0.5kb downstream 0.5kb downstream 2946 true Chr13: 28860027-28862972 Glycine max
Glyma.13G174400 0.5kb downstream 0.5kb downstream 500 false Chr13: 28860027-28860526 Glycine max
Glyma.13G174400 1.0kb upstream 1.0kb upstream 3446 true Chr13: 28860527-28863972 Glycine max
Glyma.13G174400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28862973-28863972 Glycine max
Glyma.13G174400 1.0kb downstream 1.0kb downstream 3446 true Chr13: 28859527-28862972 Glycine max
Glyma.13G174400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28859527-28860526 Glycine max
Glyma.13G174400 2.0kb upstream 2.0kb upstream 4446 true Chr13: 28860527-28864972 Glycine max
Glyma.13G174400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28862973-28864972 Glycine max
Glyma.13G174400 2.0kb downstream 2.0kb downstream 4446 true Chr13: 28858527-28862972 Glycine max
Glyma.13G174400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28858527-28860526 Glycine max
Glyma.13G174400 5.0kb upstream 5.0kb upstream 7446 true Chr13: 28860527-28867972 Glycine max
Glyma.13G174400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28862973-28867972 Glycine max
Glyma.13G174400 5.0kb downstream 5.0kb downstream 7446 true Chr13: 28855527-28862972 Glycine max
Glyma.13G174400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28855527-28860526 Glycine max
Glyma.13G174400 10.0kb upstream 10.0kb upstream 12446 true Chr13: 28860527-28872972 Glycine max
Glyma.13G174400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28862973-28872972 Glycine max
Glyma.13G174400 10.0kb downstream 10.0kb downstream 12446 true Chr13: 28850527-28862972 Glycine max
Glyma.13G174400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28850527-28860526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303128 5265 Fabidae View MSA
124050335 5270 Rosid View MSA
123743781 5271 Pentapetalae View MSA
122792695 5272 Eudicot View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.210407 0.0 0.789213 Low Low
cufflinks 4.3043 0.0 11.9566   High
cufflinks 0.620014 0.0 2.18263    
cufflinks 1.50987 0.0 4.78175    
cufflinks 1.67983 0.0 5.22809    
cufflinks 1.27838 0.0 4.14442    
cufflinks 2.04384 0.0 6.19576    
cufflinks 1.32919 0.0 4.29338    
cufflinks 1.79819 0.0 5.5644    
cufflinks 2.888        
cufflinks 0.272       Low
cufflinks 2.572        
cufflinks 3.433        
cufflinks 4.544        
cufflinks 0.322       Low
cufflinks 5.59        
cufflinks 0.795        
cufflinks 2.328        
cufflinks 8.98     High High
cufflinks 4.205        
cufflinks 0.345       Low
cufflinks 5.472        
cufflinks 8.55     High High
cufflinks 0.419       Low
cufflinks 4.227        
cufflinks 0.44       Low

0 Strain