Gene : Glyma.13G164800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1648
Name:  ? Glyma.13G164800 Secondary Identifier:  ? PAC:30500168
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G164800 0.5kb upstream 0.5kb upstream 2643 true Chr13: 27967025-27969667 Glycine max
Glyma.13G164800 0.5kb upstream 0.5kb upstream 500 false Chr13: 27969168-27969667 Glycine max
Glyma.13G164800 0.5kb downstream 0.5kb downstream 2643 true Chr13: 27966525-27969167 Glycine max
Glyma.13G164800 0.5kb downstream 0.5kb downstream 500 false Chr13: 27966525-27967024 Glycine max
Glyma.13G164800 1.0kb upstream 1.0kb upstream 3143 true Chr13: 27967025-27970167 Glycine max
Glyma.13G164800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27969168-27970167 Glycine max
Glyma.13G164800 1.0kb downstream 1.0kb downstream 3143 true Chr13: 27966025-27969167 Glycine max
Glyma.13G164800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27966025-27967024 Glycine max
Glyma.13G164800 2.0kb upstream 2.0kb upstream 4143 true Chr13: 27967025-27971167 Glycine max
Glyma.13G164800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27969168-27971167 Glycine max
Glyma.13G164800 2.0kb downstream 2.0kb downstream 4143 true Chr13: 27965025-27969167 Glycine max
Glyma.13G164800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27965025-27967024 Glycine max
Glyma.13G164800 5.0kb upstream 5.0kb upstream 7143 true Chr13: 27967025-27974167 Glycine max
Glyma.13G164800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27969168-27974167 Glycine max
Glyma.13G164800 5.0kb downstream 5.0kb downstream 7143 true Chr13: 27962025-27969167 Glycine max
Glyma.13G164800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27962025-27967024 Glycine max
Glyma.13G164800 10.0kb upstream 10.0kb upstream 12143 true Chr13: 27967025-27979167 Glycine max
Glyma.13G164800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27969168-27979167 Glycine max
Glyma.13G164800 10.0kb downstream 10.0kb downstream 12143 true Chr13: 27957025-27969167 Glycine max
Glyma.13G164800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27957025-27967024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312691 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0351542 0.0 0.150155 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.82089 0.0 14.7806    
cufflinks 2.45153 0.0 8.24844    
cufflinks 0.0959215 0.0 0.386033 Low Low
cufflinks 1.38371 0.0 4.90744    
cufflinks 6.79149 0.0 19.8456    
cufflinks 0.095     Low  
cufflinks 0.081        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.496       High
cufflinks 6.817     High High
cufflinks 6.416     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.229        
cufflinks 0.01     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132        
cufflinks 0.005     Low Low
cufflinks 0.009     Low Low
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.3        

0 Strain