Gene : Glyma.13G167400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR34203:SF2 - EXPRESSED PROTEIN Genomic Order:  1674
Name:  ? Glyma.13G167400 Secondary Identifier:  ? PAC:30504002
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G167400 0.5kb upstream 0.5kb upstream 4506 true Chr13: 28190234-28194739 Glycine max
Glyma.13G167400 0.5kb upstream 0.5kb upstream 500 false Chr13: 28194240-28194739 Glycine max
Glyma.13G167400 0.5kb downstream 0.5kb downstream 4506 true Chr13: 28189734-28194239 Glycine max
Glyma.13G167400 0.5kb downstream 0.5kb downstream 500 false Chr13: 28189734-28190233 Glycine max
Glyma.13G167400 1.0kb upstream 1.0kb upstream 5006 true Chr13: 28190234-28195239 Glycine max
Glyma.13G167400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28194240-28195239 Glycine max
Glyma.13G167400 1.0kb downstream 1.0kb downstream 5006 true Chr13: 28189234-28194239 Glycine max
Glyma.13G167400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28189234-28190233 Glycine max
Glyma.13G167400 2.0kb upstream 2.0kb upstream 6006 true Chr13: 28190234-28196239 Glycine max
Glyma.13G167400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28194240-28196239 Glycine max
Glyma.13G167400 2.0kb downstream 2.0kb downstream 6006 true Chr13: 28188234-28194239 Glycine max
Glyma.13G167400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28188234-28190233 Glycine max
Glyma.13G167400 5.0kb upstream 5.0kb upstream 9006 true Chr13: 28190234-28199239 Glycine max
Glyma.13G167400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28194240-28199239 Glycine max
Glyma.13G167400 5.0kb downstream 5.0kb downstream 9006 true Chr13: 28185234-28194239 Glycine max
Glyma.13G167400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28185234-28190233 Glycine max
Glyma.13G167400 10.0kb upstream 10.0kb upstream 14006 true Chr13: 28190234-28204239 Glycine max
Glyma.13G167400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28194240-28204239 Glycine max
Glyma.13G167400 10.0kb downstream 10.0kb downstream 14006 true Chr13: 28180234-28194239 Glycine max
Glyma.13G167400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28180234-28190233 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308699 5265 Fabidae View MSA
124060893 5270 Rosid View MSA
123751277 5271 Pentapetalae View MSA
122786688 5272 Eudicot View MSA
122043086 5273 Angiosperm View MSA
121350667 5274 Embryophyte View MSA
123426731 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.96271 0.0 43.2787    
cufflinks 7.47432 0.0 27.0146    
cufflinks 4.23296 0.0 16.8251   Low
cufflinks 8.83863 0.0 29.3518    
cufflinks 10.1818 0.0 30.5575    
cufflinks 6.51636 0.0 20.0093    
cufflinks 6.03225 0.0 18.5364    
cufflinks 13.2131 0.0 42.5572   High
cufflinks 5.2195 0.0 16.3259   Low
cufflinks 5.638       High
cufflinks 0.207       Low
cufflinks 1.321        
cufflinks 5.313       High
cufflinks 7.252     High High
cufflinks 0.457       Low
cufflinks 3.016        
cufflinks 0.854        
cufflinks 2.513        
cufflinks 3.332        
cufflinks 2.538        
cufflinks 0.503       Low
cufflinks 2.59        
cufflinks 3.897        
cufflinks 0.299       Low
cufflinks 2.558        
cufflinks 0.753        

0 Strain