Gene : Glyma.13G168300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11886//PTHR11886:SF51 - DYNEIN LIGHT CHAIN Genomic Order:  1683
Name:  ? Glyma.13G168300 Secondary Identifier:  ? PAC:30504480
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G168300 0.5kb upstream 0.5kb upstream 3068 true Chr13: 28265146-28268213 Glycine max
Glyma.13G168300 0.5kb upstream 0.5kb upstream 500 false Chr13: 28265146-28265645 Glycine max
Glyma.13G168300 0.5kb downstream 0.5kb downstream 3068 true Chr13: 28265646-28268713 Glycine max
Glyma.13G168300 0.5kb downstream 0.5kb downstream 500 false Chr13: 28268214-28268713 Glycine max
Glyma.13G168300 1.0kb upstream 1.0kb upstream 3568 true Chr13: 28264646-28268213 Glycine max
Glyma.13G168300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28264646-28265645 Glycine max
Glyma.13G168300 1.0kb downstream 1.0kb downstream 3568 true Chr13: 28265646-28269213 Glycine max
Glyma.13G168300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28268214-28269213 Glycine max
Glyma.13G168300 2.0kb upstream 2.0kb upstream 4568 true Chr13: 28263646-28268213 Glycine max
Glyma.13G168300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28263646-28265645 Glycine max
Glyma.13G168300 2.0kb downstream 2.0kb downstream 4568 true Chr13: 28265646-28270213 Glycine max
Glyma.13G168300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28268214-28270213 Glycine max
Glyma.13G168300 5.0kb upstream 5.0kb upstream 7568 true Chr13: 28260646-28268213 Glycine max
Glyma.13G168300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28260646-28265645 Glycine max
Glyma.13G168300 5.0kb downstream 5.0kb downstream 7568 true Chr13: 28265646-28273213 Glycine max
Glyma.13G168300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28268214-28273213 Glycine max
Glyma.13G168300 10.0kb upstream 10.0kb upstream 12568 true Chr13: 28255646-28268213 Glycine max
Glyma.13G168300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28255646-28265645 Glycine max
Glyma.13G168300 10.0kb downstream 10.0kb downstream 12568 true Chr13: 28265646-28278213 Glycine max
Glyma.13G168300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28268214-28278213 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297735 5265 Fabidae View MSA
124066792 5270 Rosid View MSA
123747752 5271 Pentapetalae View MSA
122794062 5272 Eudicot View MSA
122048420 5273 Angiosperm View MSA
121310962 5274 Embryophyte View MSA
123348328 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97259 0.0 9.5485    
cufflinks 0.0593052 0.0 0.241952 Low Low
cufflinks 2.02899 0.0 6.81378    
cufflinks 0.958911 0.0 3.45363    
cufflinks 4.47005 0.0 13.5594    
cufflinks 7.01357 0.0 20.0165   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.227404 0.0 0.879857 Low Low
cufflinks 2.67197 0.0 8.69484    
cufflinks 0.436        
cufflinks 1.052        
cufflinks 1.568        
cufflinks 4.684       High
cufflinks 4.279       High
cufflinks 0.064       Low
cufflinks 0.081     Low Low
cufflinks 1.929        
cufflinks 0.98        
cufflinks 0.05     Low Low
cufflinks 0.123        
cufflinks 1.639        
cufflinks 0.166        
cufflinks 0.035     Low Low
cufflinks 0.682        
cufflinks 0.153        
cufflinks 1.912        

0 Strain