Gene : Glyma.13G157800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31675:SF6 - AXIAL REGULATOR YABBY 5 Genomic Order:  1578
Name:  ? Glyma.13G157800 Secondary Identifier:  ? PAC:30501038
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G157800 0.5kb upstream 0.5kb upstream 4687 true Chr13: 27288497-27293183 Glycine max
Glyma.13G157800 0.5kb upstream 0.5kb upstream 500 false Chr13: 27292684-27293183 Glycine max
Glyma.13G157800 0.5kb downstream 0.5kb downstream 4687 true Chr13: 27287997-27292683 Glycine max
Glyma.13G157800 0.5kb downstream 0.5kb downstream 500 false Chr13: 27287997-27288496 Glycine max
Glyma.13G157800 1.0kb upstream 1.0kb upstream 5187 true Chr13: 27288497-27293683 Glycine max
Glyma.13G157800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27292684-27293683 Glycine max
Glyma.13G157800 1.0kb downstream 1.0kb downstream 5187 true Chr13: 27287497-27292683 Glycine max
Glyma.13G157800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27287497-27288496 Glycine max
Glyma.13G157800 2.0kb upstream 2.0kb upstream 6187 true Chr13: 27288497-27294683 Glycine max
Glyma.13G157800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27292684-27294683 Glycine max
Glyma.13G157800 2.0kb downstream 2.0kb downstream 6187 true Chr13: 27286497-27292683 Glycine max
Glyma.13G157800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27286497-27288496 Glycine max
Glyma.13G157800 5.0kb upstream 5.0kb upstream 9187 true Chr13: 27288497-27297683 Glycine max
Glyma.13G157800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27292684-27297683 Glycine max
Glyma.13G157800 5.0kb downstream 5.0kb downstream 9187 true Chr13: 27283497-27292683 Glycine max
Glyma.13G157800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27283497-27288496 Glycine max
Glyma.13G157800 10.0kb upstream 10.0kb upstream 14187 true Chr13: 27288497-27302683 Glycine max
Glyma.13G157800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27292684-27302683 Glycine max
Glyma.13G157800 10.0kb downstream 10.0kb downstream 14187 true Chr13: 27278497-27292683 Glycine max
Glyma.13G157800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27278497-27288496 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302436 5265 Fabidae View MSA
124061031 5270 Rosid View MSA
123739055 5271 Pentapetalae View MSA
122791721 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.78671 0.0 22.3431    
cufflinks 20.2442 0.0 54.1643 High High
cufflinks 0.287571 0.0 1.10676    
cufflinks 3.20086 0.0 10.3521    
cufflinks 0.0149091 0.0 0.0684948 Low Low
cufflinks 1.21842 0.0 4.35994    
cufflinks 16.7924 0.0 45.2121   High
cufflinks 0.22469 0.0 0.874097 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.409        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 4.093        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.588        
cufflinks 6.137        
cufflinks 2.688        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.858        
cufflinks 5.047        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.704        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain