Gene : Glyma.13G162500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12391 - ARP2/3 COMPLEX 21 KD SUBUNIT Genomic Order:  1625
Name:  ? Glyma.13G162500 Secondary Identifier:  ? PAC:30505129
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G162500 0.5kb upstream 0.5kb upstream 3321 true Chr13: 27785225-27788545 Glycine max
Glyma.13G162500 0.5kb upstream 0.5kb upstream 500 false Chr13: 27788046-27788545 Glycine max
Glyma.13G162500 0.5kb downstream 0.5kb downstream 3321 true Chr13: 27784725-27788045 Glycine max
Glyma.13G162500 0.5kb downstream 0.5kb downstream 500 false Chr13: 27784725-27785224 Glycine max
Glyma.13G162500 1.0kb upstream 1.0kb upstream 3821 true Chr13: 27785225-27789045 Glycine max
Glyma.13G162500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27788046-27789045 Glycine max
Glyma.13G162500 1.0kb downstream 1.0kb downstream 3821 true Chr13: 27784225-27788045 Glycine max
Glyma.13G162500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27784225-27785224 Glycine max
Glyma.13G162500 2.0kb upstream 2.0kb upstream 4821 true Chr13: 27785225-27790045 Glycine max
Glyma.13G162500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27788046-27790045 Glycine max
Glyma.13G162500 2.0kb downstream 2.0kb downstream 4821 true Chr13: 27783225-27788045 Glycine max
Glyma.13G162500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27783225-27785224 Glycine max
Glyma.13G162500 5.0kb upstream 5.0kb upstream 7821 true Chr13: 27785225-27793045 Glycine max
Glyma.13G162500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27788046-27793045 Glycine max
Glyma.13G162500 5.0kb downstream 5.0kb downstream 7821 true Chr13: 27780225-27788045 Glycine max
Glyma.13G162500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27780225-27785224 Glycine max
Glyma.13G162500 10.0kb upstream 10.0kb upstream 12821 true Chr13: 27785225-27798045 Glycine max
Glyma.13G162500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27788046-27798045 Glycine max
Glyma.13G162500 10.0kb downstream 10.0kb downstream 12821 true Chr13: 27775225-27788045 Glycine max
Glyma.13G162500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27775225-27785224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026332 5273 Angiosperm View MSA
122302868 5265 Fabidae View MSA
124064390 5270 Rosid View MSA
123739720 5271 Pentapetalae View MSA
122790933 5272 Eudicot View MSA
121345545 5274 Embryophyte View MSA
123428247 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.88524 0.0 31.4843   Low
cufflinks 8.99656 0.0 33.9118    
cufflinks 25.9791 0.0 78.9055 High High
cufflinks 12.58 0.0 50.1691    
cufflinks 12.4985 0.0 50.166    
cufflinks 13.6684 0.0 53.6259    
cufflinks 9.70833 0.0 36.3431    
cufflinks 15.175 0.0 57.2845    
cufflinks 11.8307 0.0 48.2684    
cufflinks 2.605       High
cufflinks 1.627        
cufflinks 4.586       High
cufflinks 2.3        
cufflinks 2.115        
cufflinks 1.279        
cufflinks 1.484        
cufflinks 1.11       Low
cufflinks 2.129        
cufflinks 1.474        
cufflinks 1.199        
cufflinks 1.857        
cufflinks 1.345        
cufflinks 1.149       Low
cufflinks 1.641        
cufflinks 1.254        
cufflinks 1.644        

0 Strain