Gene : Glyma.13G152200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31867:SF3 - EXPANSIN-A13 Genomic Order:  1522
Name:  ? Glyma.13G152200 Secondary Identifier:  ? PAC:30505849
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G152200 0.5kb upstream 0.5kb upstream 6919 true Chr13: 26678025-26684943 Glycine max
Glyma.13G152200 0.5kb upstream 0.5kb upstream 500 false Chr13: 26684444-26684943 Glycine max
Glyma.13G152200 0.5kb downstream 0.5kb downstream 6919 true Chr13: 26677525-26684443 Glycine max
Glyma.13G152200 0.5kb downstream 0.5kb downstream 500 false Chr13: 26677525-26678024 Glycine max
Glyma.13G152200 1.0kb upstream 1.0kb upstream 7419 true Chr13: 26678025-26685443 Glycine max
Glyma.13G152200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 26684444-26685443 Glycine max
Glyma.13G152200 1.0kb downstream 1.0kb downstream 7419 true Chr13: 26677025-26684443 Glycine max
Glyma.13G152200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 26677025-26678024 Glycine max
Glyma.13G152200 2.0kb upstream 2.0kb upstream 8419 true Chr13: 26678025-26686443 Glycine max
Glyma.13G152200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 26684444-26686443 Glycine max
Glyma.13G152200 2.0kb downstream 2.0kb downstream 8419 true Chr13: 26676025-26684443 Glycine max
Glyma.13G152200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 26676025-26678024 Glycine max
Glyma.13G152200 5.0kb upstream 5.0kb upstream 11419 true Chr13: 26678025-26689443 Glycine max
Glyma.13G152200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 26684444-26689443 Glycine max
Glyma.13G152200 5.0kb downstream 5.0kb downstream 11419 true Chr13: 26673025-26684443 Glycine max
Glyma.13G152200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 26673025-26678024 Glycine max
Glyma.13G152200 10.0kb upstream 10.0kb upstream 16419 true Chr13: 26678025-26694443 Glycine max
Glyma.13G152200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 26684444-26694443 Glycine max
Glyma.13G152200 10.0kb downstream 10.0kb downstream 16419 true Chr13: 26668025-26684443 Glycine max
Glyma.13G152200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26668025-26678024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245717 5265 Fabidae Singleton cluster - no MSA
123989793 5270 Rosid Singleton cluster - no MSA
123564863 5271 Pentapetalae Singleton cluster - no MSA
122599632 5272 Eudicot Singleton cluster - no MSA
122051962 5273 Angiosperm View MSA
121312837 5274 Embryophyte View MSA
123349974 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.169988 0.0 0.674125 Low Low
cufflinks 0.633626 0.0 3.13562    
cufflinks 0.127356 0.0 1.079 Low Low
cufflinks 0.458218 0.0 2.30064    
cufflinks 0.490342 0.0 3.38798    
cufflinks 0.272983 0.0 1.06244 Low  
cufflinks 0.779647 0.0 3.75437   High
cufflinks 0.439326 0.0 2.88577    
cufflinks 0.444462 0.0 2.15574    
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low High
cufflinks 0.018     Low High
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain