Gene : Glyma.13G155800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11177//PTHR11177:SF208 - CHITINASE Genomic Order:  1558
Name:  ? Glyma.13G155800 Secondary Identifier:  ? PAC:30501540
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G155800 0.5kb upstream 0.5kb upstream 2769 true Chr13: 27091069-27093837 Glycine max
Glyma.13G155800 0.5kb upstream 0.5kb upstream 500 false Chr13: 27091069-27091568 Glycine max
Glyma.13G155800 0.5kb downstream 0.5kb downstream 2769 true Chr13: 27091569-27094337 Glycine max
Glyma.13G155800 0.5kb downstream 0.5kb downstream 500 false Chr13: 27093838-27094337 Glycine max
Glyma.13G155800 1.0kb upstream 1.0kb upstream 3269 true Chr13: 27090569-27093837 Glycine max
Glyma.13G155800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27090569-27091568 Glycine max
Glyma.13G155800 1.0kb downstream 1.0kb downstream 3269 true Chr13: 27091569-27094837 Glycine max
Glyma.13G155800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27093838-27094837 Glycine max
Glyma.13G155800 2.0kb upstream 2.0kb upstream 4269 true Chr13: 27089569-27093837 Glycine max
Glyma.13G155800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27089569-27091568 Glycine max
Glyma.13G155800 2.0kb downstream 2.0kb downstream 4269 true Chr13: 27091569-27095837 Glycine max
Glyma.13G155800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27093838-27095837 Glycine max
Glyma.13G155800 5.0kb upstream 5.0kb upstream 7269 true Chr13: 27086569-27093837 Glycine max
Glyma.13G155800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27086569-27091568 Glycine max
Glyma.13G155800 5.0kb downstream 5.0kb downstream 7269 true Chr13: 27091569-27098837 Glycine max
Glyma.13G155800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27093838-27098837 Glycine max
Glyma.13G155800 10.0kb upstream 10.0kb upstream 12269 true Chr13: 27081569-27093837 Glycine max
Glyma.13G155800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27081569-27091568 Glycine max
Glyma.13G155800 10.0kb downstream 10.0kb downstream 12269 true Chr13: 27091569-27103837 Glycine max
Glyma.13G155800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27093838-27103837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305195 5265 Fabidae View MSA
124073719 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0161193 0.0 0.0728999 Low  
cufflinks 0.0641547 0.0 0.261737 Low  
cufflinks 0.0109033 0.0 0.051586 Low Low
cufflinks 0.0453946 0.0 0.189088 Low  
cufflinks 2.91601 0.0 9.39922    
cufflinks 19.2815 0.0 51.5337   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.7865 0.0 11.8069    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.426        
cufflinks 0.007     Low Low
cufflinks 5.722       High
cufflinks 3.648       High
cufflinks 0.06        
cufflinks 0.111        
cufflinks 0.432        
cufflinks 0.016     Low Low
cufflinks 0.031     Low Low
cufflinks 0.111        
cufflinks 0.414        
cufflinks 0.118        
cufflinks 0.204        
cufflinks 0.353        
cufflinks 0.114        
cufflinks 1.308       High

0 Strain