Gene : Glyma.13G198700 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  1987
Name:  ? Glyma.13G198700 Secondary Identifier:  ? PAC:30505798
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G198700 0.5kb upstream 0.5kb upstream 5196 true Chr13: 31242680-31247875 Glycine max
Glyma.13G198700 0.5kb upstream 0.5kb upstream 500 false Chr13: 31242680-31243179 Glycine max
Glyma.13G198700 0.5kb downstream 0.5kb downstream 5196 true Chr13: 31243180-31248375 Glycine max
Glyma.13G198700 0.5kb downstream 0.5kb downstream 500 false Chr13: 31247876-31248375 Glycine max
Glyma.13G198700 1.0kb upstream 1.0kb upstream 5696 true Chr13: 31242180-31247875 Glycine max
Glyma.13G198700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31242180-31243179 Glycine max
Glyma.13G198700 1.0kb downstream 1.0kb downstream 5696 true Chr13: 31243180-31248875 Glycine max
Glyma.13G198700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31247876-31248875 Glycine max
Glyma.13G198700 2.0kb upstream 2.0kb upstream 6696 true Chr13: 31241180-31247875 Glycine max
Glyma.13G198700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31241180-31243179 Glycine max
Glyma.13G198700 2.0kb downstream 2.0kb downstream 6696 true Chr13: 31243180-31249875 Glycine max
Glyma.13G198700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31247876-31249875 Glycine max
Glyma.13G198700 5.0kb upstream 5.0kb upstream 9696 true Chr13: 31238180-31247875 Glycine max
Glyma.13G198700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31238180-31243179 Glycine max
Glyma.13G198700 5.0kb downstream 5.0kb downstream 9696 true Chr13: 31243180-31252875 Glycine max
Glyma.13G198700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31247876-31252875 Glycine max
Glyma.13G198700 10.0kb upstream 10.0kb upstream 14696 true Chr13: 31233180-31247875 Glycine max
Glyma.13G198700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31233180-31243179 Glycine max
Glyma.13G198700 10.0kb downstream 10.0kb downstream 14696 true Chr13: 31243180-31257875 Glycine max
Glyma.13G198700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31247876-31257875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297723 5265 Fabidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44864 0.0 9.37231   Low
cufflinks 5.70469 0.0 23.6979   High
cufflinks 2.8476 0.0 14.349    
cufflinks 5.55205 0.0 26.1861   High
cufflinks 2.4386 0.0 11.3499    
cufflinks 3.15052 0.0 11.364    
cufflinks 5.798 0.0 21.1857   High
cufflinks 3.54276 0.0 14.4438    
cufflinks 2.1069 0.0 10.5397    
cufflinks 0.405        
cufflinks 0.098       Low
cufflinks 0.482        
cufflinks 0.403        
cufflinks 0.369        
cufflinks 0.069       Low
cufflinks 0.455        
cufflinks 0.139        
cufflinks 0.524        
cufflinks 0.899       High
cufflinks 0.254        
cufflinks 0.092       Low
cufflinks 0.336        
cufflinks 0.515        
cufflinks 0.086       Low
cufflinks 0.402        
cufflinks 0.175        

0 Strain