Gene : Glyma.13G205600 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  2056
Name:  ? Glyma.13G205600 Secondary Identifier:  ? PAC:30502741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G205600 0.5kb upstream 0.5kb upstream 4838 true Chr13: 31983358-31988195 Glycine max
Glyma.13G205600 0.5kb upstream 0.5kb upstream 500 false Chr13: 31987696-31988195 Glycine max
Glyma.13G205600 0.5kb downstream 0.5kb downstream 4838 true Chr13: 31982858-31987695 Glycine max
Glyma.13G205600 0.5kb downstream 0.5kb downstream 500 false Chr13: 31982858-31983357 Glycine max
Glyma.13G205600 1.0kb upstream 1.0kb upstream 5338 true Chr13: 31983358-31988695 Glycine max
Glyma.13G205600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31987696-31988695 Glycine max
Glyma.13G205600 1.0kb downstream 1.0kb downstream 5338 true Chr13: 31982358-31987695 Glycine max
Glyma.13G205600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31982358-31983357 Glycine max
Glyma.13G205600 2.0kb upstream 2.0kb upstream 6338 true Chr13: 31983358-31989695 Glycine max
Glyma.13G205600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31987696-31989695 Glycine max
Glyma.13G205600 2.0kb downstream 2.0kb downstream 6338 true Chr13: 31981358-31987695 Glycine max
Glyma.13G205600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31981358-31983357 Glycine max
Glyma.13G205600 5.0kb upstream 5.0kb upstream 9338 true Chr13: 31983358-31992695 Glycine max
Glyma.13G205600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31987696-31992695 Glycine max
Glyma.13G205600 5.0kb downstream 5.0kb downstream 9338 true Chr13: 31978358-31987695 Glycine max
Glyma.13G205600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31978358-31983357 Glycine max
Glyma.13G205600 10.0kb upstream 10.0kb upstream 14338 true Chr13: 31983358-31997695 Glycine max
Glyma.13G205600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31987696-31997695 Glycine max
Glyma.13G205600 10.0kb downstream 10.0kb downstream 14338 true Chr13: 31973358-31987695 Glycine max
Glyma.13G205600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31973358-31983357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314408 5265 Fabidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.684 0.0 802.419 High  
cufflinks 182.239 0.0 1046.76 High  
cufflinks 169.569 0.0 933.319 High  
cufflinks 226.572 0.0 1497.51 High  
cufflinks 257.609 0.0 1909.38 High  
cufflinks 156.459 0.0 841.009 High  
cufflinks 613.406 0.0 9232.05 High High
cufflinks 191.894 0.0 1146.08 High  
cufflinks 181.06 0.0 1054.22 High  
cufflinks 21.777     High Low
cufflinks 36.396     High High
cufflinks 23.101     High Low
cufflinks 29.367     High  
cufflinks 37.745     High High
cufflinks 32.146     High  
cufflinks 28.344     High  
cufflinks 26.331     High  
cufflinks 24.349     High Low
cufflinks 29.635     High  
cufflinks 33.263     High  
cufflinks 33.501     High  
cufflinks 28.932     High  
cufflinks 21.827     High Low
cufflinks 35.763     High High
cufflinks 29.53     High  
cufflinks 29.259     High  

0 Strain