Gene : Glyma.13G197600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR26402//PTHR26402:SF574 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  1976
Name:  ? Glyma.13G197600 Secondary Identifier:  ? PAC:30502011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G197600 0.5kb upstream 0.5kb upstream 2831 true Chr13: 31168936-31171766 Glycine max
Glyma.13G197600 0.5kb upstream 0.5kb upstream 500 false Chr13: 31168936-31169435 Glycine max
Glyma.13G197600 0.5kb downstream 0.5kb downstream 2831 true Chr13: 31169436-31172266 Glycine max
Glyma.13G197600 0.5kb downstream 0.5kb downstream 500 false Chr13: 31171767-31172266 Glycine max
Glyma.13G197600 1.0kb upstream 1.0kb upstream 3331 true Chr13: 31168436-31171766 Glycine max
Glyma.13G197600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31168436-31169435 Glycine max
Glyma.13G197600 1.0kb downstream 1.0kb downstream 3331 true Chr13: 31169436-31172766 Glycine max
Glyma.13G197600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31171767-31172766 Glycine max
Glyma.13G197600 2.0kb upstream 2.0kb upstream 4331 true Chr13: 31167436-31171766 Glycine max
Glyma.13G197600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31167436-31169435 Glycine max
Glyma.13G197600 2.0kb downstream 2.0kb downstream 4331 true Chr13: 31169436-31173766 Glycine max
Glyma.13G197600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31171767-31173766 Glycine max
Glyma.13G197600 5.0kb upstream 5.0kb upstream 7331 true Chr13: 31164436-31171766 Glycine max
Glyma.13G197600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31164436-31169435 Glycine max
Glyma.13G197600 5.0kb downstream 5.0kb downstream 7331 true Chr13: 31169436-31176766 Glycine max
Glyma.13G197600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31171767-31176766 Glycine max
Glyma.13G197600 10.0kb upstream 10.0kb upstream 12331 true Chr13: 31159436-31171766 Glycine max
Glyma.13G197600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31159436-31169435 Glycine max
Glyma.13G197600 10.0kb downstream 10.0kb downstream 12331 true Chr13: 31169436-31181766 Glycine max
Glyma.13G197600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31171767-31181766 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303928 5265 Fabidae View MSA
124073776 5270 Rosid View MSA
123749926 5271 Pentapetalae View MSA
122796134 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0519981 0.0 0.217669 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.00746 0.0 23.5942    
cufflinks 10.2169 0.0 29.1266    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.3629 0.0 8.14771    
cufflinks 0.007     Low Low
cufflinks 0.055        
cufflinks 0.075     Low  
cufflinks 7.032       High
cufflinks 8.055     High High
cufflinks 0.215        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.016     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.007     Low Low
cufflinks 0.015     Low  
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.148        

0 Strain