Gene : Glyma.13G189400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  1894
Name:  ? Glyma.13G189400 Secondary Identifier:  ? PAC:30503190
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G189400 0.5kb upstream 0.5kb upstream 9416 true Chr13: 30286018-30295433 Glycine max
Glyma.13G189400 0.5kb upstream 0.5kb upstream 500 false Chr13: 30286018-30286517 Glycine max
Glyma.13G189400 0.5kb downstream 0.5kb downstream 9416 true Chr13: 30286518-30295933 Glycine max
Glyma.13G189400 0.5kb downstream 0.5kb downstream 500 false Chr13: 30295434-30295933 Glycine max
Glyma.13G189400 1.0kb upstream 1.0kb upstream 9916 true Chr13: 30285518-30295433 Glycine max
Glyma.13G189400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30285518-30286517 Glycine max
Glyma.13G189400 1.0kb downstream 1.0kb downstream 9916 true Chr13: 30286518-30296433 Glycine max
Glyma.13G189400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30295434-30296433 Glycine max
Glyma.13G189400 2.0kb upstream 2.0kb upstream 10916 true Chr13: 30284518-30295433 Glycine max
Glyma.13G189400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30284518-30286517 Glycine max
Glyma.13G189400 2.0kb downstream 2.0kb downstream 10916 true Chr13: 30286518-30297433 Glycine max
Glyma.13G189400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30295434-30297433 Glycine max
Glyma.13G189400 5.0kb upstream 5.0kb upstream 13916 true Chr13: 30281518-30295433 Glycine max
Glyma.13G189400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30281518-30286517 Glycine max
Glyma.13G189400 5.0kb downstream 5.0kb downstream 13916 true Chr13: 30286518-30300433 Glycine max
Glyma.13G189400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30295434-30300433 Glycine max
Glyma.13G189400 10.0kb upstream 10.0kb upstream 18916 true Chr13: 30276518-30295433 Glycine max
Glyma.13G189400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30276518-30286517 Glycine max
Glyma.13G189400 10.0kb downstream 10.0kb downstream 18916 true Chr13: 30286518-30305433 Glycine max
Glyma.13G189400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30295434-30305433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309450 5265 Fabidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7016 0.0 57.8988    
cufflinks 24.7521 0.0 66.108 High High
cufflinks 20.9749 0.0 55.9583 High  
cufflinks 15.2548 0.0 40.9083   Low
cufflinks 17.6486 0.0 47.1594    
cufflinks 21.5492 0.0 57.4909    
cufflinks 20.5617 0.0 54.8597    
cufflinks 17.5001 0.0 46.7657    
cufflinks 22.0627 0.0 58.8646 High  
cufflinks 2.515       Low
cufflinks 5.533     High High
cufflinks 3.032        
cufflinks 2.319       Low
cufflinks 2.15       Low
cufflinks 7.236     High High
cufflinks 4.228        
cufflinks 4.686        
cufflinks 3.147        
cufflinks 3.842        
cufflinks 4.045        
cufflinks 5.391        
cufflinks 4.221        
cufflinks 3.716        
cufflinks 4.975        
cufflinks 3.759        
cufflinks 4.87        

0 Strain