Gene : Glyma.13G178500 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  1785
Name:  ? Glyma.13G178500 Secondary Identifier:  ? PAC:30505198
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G178500 0.5kb upstream 0.5kb upstream 4741 true Chr13: 29211898-29216638 Glycine max
Glyma.13G178500 0.5kb upstream 0.5kb upstream 500 false Chr13: 29216139-29216638 Glycine max
Glyma.13G178500 0.5kb downstream 0.5kb downstream 4741 true Chr13: 29211398-29216138 Glycine max
Glyma.13G178500 0.5kb downstream 0.5kb downstream 500 false Chr13: 29211398-29211897 Glycine max
Glyma.13G178500 1.0kb upstream 1.0kb upstream 5241 true Chr13: 29211898-29217138 Glycine max
Glyma.13G178500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29216139-29217138 Glycine max
Glyma.13G178500 1.0kb downstream 1.0kb downstream 5241 true Chr13: 29210898-29216138 Glycine max
Glyma.13G178500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29210898-29211897 Glycine max
Glyma.13G178500 2.0kb upstream 2.0kb upstream 6241 true Chr13: 29211898-29218138 Glycine max
Glyma.13G178500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29216139-29218138 Glycine max
Glyma.13G178500 2.0kb downstream 2.0kb downstream 6241 true Chr13: 29209898-29216138 Glycine max
Glyma.13G178500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29209898-29211897 Glycine max
Glyma.13G178500 5.0kb upstream 5.0kb upstream 9241 true Chr13: 29211898-29221138 Glycine max
Glyma.13G178500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29216139-29221138 Glycine max
Glyma.13G178500 5.0kb downstream 5.0kb downstream 9241 true Chr13: 29206898-29216138 Glycine max
Glyma.13G178500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29206898-29211897 Glycine max
Glyma.13G178500 10.0kb upstream 10.0kb upstream 14241 true Chr13: 29211898-29226138 Glycine max
Glyma.13G178500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29216139-29226138 Glycine max
Glyma.13G178500 10.0kb downstream 10.0kb downstream 14241 true Chr13: 29201898-29216138 Glycine max
Glyma.13G178500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29201898-29211897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7982 0.0 75.9408    
cufflinks 19.5976 0.0 69.1796    
cufflinks 7.49328 0.0 29.0958   Low
cufflinks 14.3566 0.0 53.0467    
cufflinks 15.9081 0.0 57.0001    
cufflinks 9.93329 0.0 39.993    
cufflinks 20.0738 0.0 70.2056    
cufflinks 21.1296 0.0 73.4583 High  
cufflinks 7.94503 0.0 34.4709   Low
cufflinks 5.093       High
cufflinks 2.154        
cufflinks 1.397       Low
cufflinks 1.773       Low
cufflinks 1.37       Low
cufflinks 2.601        
cufflinks 3.138        
cufflinks 2.268        
cufflinks 2.239        
cufflinks 3.596        
cufflinks 2.376        
cufflinks 2.881        
cufflinks 2.941        
cufflinks 4.123       High
cufflinks 4.143       High
cufflinks 2.424        
cufflinks 2.229        

0 Strain