Gene : Glyma.13G178600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11449 - RIBOSOMAL PROTEIN L30 Genomic Order:  1786
Name:  ? Glyma.13G178600 Secondary Identifier:  ? PAC:30505607
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G178600 0.5kb upstream 0.5kb upstream 837 true Chr13: 29225014-29225850 Glycine max
Glyma.13G178600 0.5kb upstream 0.5kb upstream 500 false Chr13: 29225014-29225513 Glycine max
Glyma.13G178600 0.5kb downstream 0.5kb downstream 837 true Chr13: 29225514-29226350 Glycine max
Glyma.13G178600 0.5kb downstream 0.5kb downstream 500 false Chr13: 29225851-29226350 Glycine max
Glyma.13G178600 1.0kb upstream 1.0kb upstream 1337 true Chr13: 29224514-29225850 Glycine max
Glyma.13G178600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29224514-29225513 Glycine max
Glyma.13G178600 1.0kb downstream 1.0kb downstream 1337 true Chr13: 29225514-29226850 Glycine max
Glyma.13G178600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29225851-29226850 Glycine max
Glyma.13G178600 2.0kb upstream 2.0kb upstream 2337 true Chr13: 29223514-29225850 Glycine max
Glyma.13G178600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29223514-29225513 Glycine max
Glyma.13G178600 2.0kb downstream 2.0kb downstream 2337 true Chr13: 29225514-29227850 Glycine max
Glyma.13G178600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29225851-29227850 Glycine max
Glyma.13G178600 5.0kb upstream 5.0kb upstream 5337 true Chr13: 29220514-29225850 Glycine max
Glyma.13G178600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29220514-29225513 Glycine max
Glyma.13G178600 5.0kb downstream 5.0kb downstream 5337 true Chr13: 29225514-29230850 Glycine max
Glyma.13G178600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29225851-29230850 Glycine max
Glyma.13G178600 10.0kb upstream 10.0kb upstream 10337 true Chr13: 29215514-29225850 Glycine max
Glyma.13G178600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29215514-29225513 Glycine max
Glyma.13G178600 10.0kb downstream 10.0kb downstream 10337 true Chr13: 29225514-29235850 Glycine max
Glyma.13G178600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29225851-29235850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314746 5265 Fabidae View MSA
124064182 5270 Rosid View MSA
123750614 5271 Pentapetalae View MSA
122788206 5272 Eudicot View MSA
122051684 5273 Angiosperm View MSA
121344063 5274 Embryophyte View MSA
123425041 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 19.09     High  
cufflinks 5.898     High Low
cufflinks 15.092     High  
cufflinks 55.131     High High
cufflinks 70.816     High High
cufflinks 6.416     High Low
cufflinks 16.66     High  
cufflinks 11.812     High  
cufflinks 18.004     High  
cufflinks 20.017     High  
cufflinks 10.437     High  
cufflinks 9.785     High  
cufflinks 12.388     High  
cufflinks 18.926     High  
cufflinks 6.877     High Low
cufflinks 15.717     High  
cufflinks 13.815     High  

0 Strain