Gene : Glyma.13G179400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11649//PTHR11649:SF49 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  1794
Name:  ? Glyma.13G179400 Secondary Identifier:  ? PAC:30503447
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G179400 0.5kb upstream 0.5kb upstream 3976 true Chr13: 29296613-29300588 Glycine max
Glyma.13G179400 0.5kb upstream 0.5kb upstream 500 false Chr13: 29296613-29297112 Glycine max
Glyma.13G179400 0.5kb downstream 0.5kb downstream 3976 true Chr13: 29297113-29301088 Glycine max
Glyma.13G179400 0.5kb downstream 0.5kb downstream 500 false Chr13: 29300589-29301088 Glycine max
Glyma.13G179400 1.0kb upstream 1.0kb upstream 4476 true Chr13: 29296113-29300588 Glycine max
Glyma.13G179400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29296113-29297112 Glycine max
Glyma.13G179400 1.0kb downstream 1.0kb downstream 4476 true Chr13: 29297113-29301588 Glycine max
Glyma.13G179400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29300589-29301588 Glycine max
Glyma.13G179400 2.0kb upstream 2.0kb upstream 5476 true Chr13: 29295113-29300588 Glycine max
Glyma.13G179400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29295113-29297112 Glycine max
Glyma.13G179400 2.0kb downstream 2.0kb downstream 5476 true Chr13: 29297113-29302588 Glycine max
Glyma.13G179400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29300589-29302588 Glycine max
Glyma.13G179400 5.0kb upstream 5.0kb upstream 8476 true Chr13: 29292113-29300588 Glycine max
Glyma.13G179400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29292113-29297112 Glycine max
Glyma.13G179400 5.0kb downstream 5.0kb downstream 8476 true Chr13: 29297113-29305588 Glycine max
Glyma.13G179400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29300589-29305588 Glycine max
Glyma.13G179400 10.0kb upstream 10.0kb upstream 13476 true Chr13: 29287113-29300588 Glycine max
Glyma.13G179400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29287113-29297112 Glycine max
Glyma.13G179400 10.0kb downstream 10.0kb downstream 13476 true Chr13: 29297113-29310588 Glycine max
Glyma.13G179400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29300589-29310588 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305806 5265 Fabidae View MSA
124074184 5270 Rosid View MSA
123739065 5271 Pentapetalae View MSA
122788793 5272 Eudicot View MSA
122045956 5273 Angiosperm View MSA
121345764 5274 Embryophyte View MSA
123427955 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.01835 0.0 16.8673   High
cufflinks 3.4965 0.0 10.4601    
cufflinks 2.91924 0.0 8.96927    
cufflinks 4.78736 0.0 13.7398    
cufflinks 2.73739 0.0 8.47318    
cufflinks 1.18691 0.0 4.09615   Low
cufflinks 4.7313 0.0 13.6155    
cufflinks 2.73204 0.0 8.44826    
cufflinks 2.59903 0.0 8.0993    
cufflinks 1.061        
cufflinks 0.561       Low
cufflinks 2.936        
cufflinks 1.195        
cufflinks 1.675        
cufflinks 0.863        
cufflinks 2.909        
cufflinks 0.457       Low
cufflinks 5.23       High
cufflinks 2.374        
cufflinks 3.657       High
cufflinks 0.693        
cufflinks 3.1        
cufflinks 3.87       High
cufflinks 0.564       Low
cufflinks 3.049        
cufflinks 0.555       Low

0 Strain