Gene : MisinT525900 M. sinensis v7.1
Defline:  (1 of 3) PTHR11851//PTHR11851:SF138 - METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? MisinT525900 Secondary Identifier:  ? PAC:40440147
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Msinensis PWY-3781 Miscanthus sinensis pathologic  
Msinensis PWY-7279 Miscanthus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MisinT525900 0.5kb upstream 0.5kb upstream 5363 true scaffold02317: 6559-11921 Miscanthus sinensis
MisinT525900 0.5kb upstream 0.5kb upstream 500 false scaffold02317: 11422-11921 Miscanthus sinensis
MisinT525900 0.5kb downstream 0.5kb downstream 5363 true scaffold02317: 6059-11421 Miscanthus sinensis
MisinT525900 0.5kb downstream 0.5kb downstream 500 false scaffold02317: 6059-6558 Miscanthus sinensis
MisinT525900 1.0kb upstream 1.0kb upstream 5863 true scaffold02317: 6559-12421 Miscanthus sinensis
MisinT525900 1.0kb upstream 1.0kb upstream 1000 false scaffold02317: 11422-12421 Miscanthus sinensis
MisinT525900 1.0kb downstream 1.0kb downstream 5863 true scaffold02317: 5559-11421 Miscanthus sinensis
MisinT525900 1.0kb downstream 1.0kb downstream 1000 false scaffold02317: 5559-6558 Miscanthus sinensis
MisinT525900 2.0kb upstream 2.0kb upstream 6863 true scaffold02317: 6559-13421 Miscanthus sinensis
MisinT525900 2.0kb upstream 2.0kb upstream 2000 false scaffold02317: 11422-13421 Miscanthus sinensis
MisinT525900 2.0kb downstream 2.0kb downstream 6863 true scaffold02317: 4559-11421 Miscanthus sinensis
MisinT525900 2.0kb downstream 2.0kb downstream 2000 false scaffold02317: 4559-6558 Miscanthus sinensis
MisinT525900 5.0kb upstream 5.0kb upstream 9863 true scaffold02317: 6559-16421 Miscanthus sinensis
MisinT525900 5.0kb upstream 5.0kb upstream 5000 false scaffold02317: 11422-16421 Miscanthus sinensis
MisinT525900 5.0kb downstream 5.0kb downstream 9863 true scaffold02317: 1559-11421 Miscanthus sinensis
MisinT525900 5.0kb downstream 5.0kb downstream 5000 false scaffold02317: 1559-6558 Miscanthus sinensis
MisinT525900 10.0kb upstream 10.0kb upstream 14863 true scaffold02317: 6559-21421 Miscanthus sinensis
MisinT525900 10.0kb upstream 10.0kb upstream 10000 false scaffold02317: 11422-21421 Miscanthus sinensis
MisinT525900 10.0kb downstream 10.0kb downstream 11421 true scaffold02317: 1-11421 Miscanthus sinensis
MisinT525900 10.0kb downstream 10.0kb downstream 6558 false scaffold02317: 1-6558 Miscanthus sinensis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122189080 5267 Panicoideae View MSA
124574686 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain