Gene : Glyma.13G226500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Genomic Order:  2265
Name:  ? Glyma.13G226500 Secondary Identifier:  ? PAC:30503391
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G226500 0.5kb upstream 0.5kb upstream 7934 true Chr13: 33898587-33906520 Glycine max
Glyma.13G226500 0.5kb upstream 0.5kb upstream 500 false Chr13: 33906021-33906520 Glycine max
Glyma.13G226500 0.5kb downstream 0.5kb downstream 7934 true Chr13: 33898087-33906020 Glycine max
Glyma.13G226500 0.5kb downstream 0.5kb downstream 500 false Chr13: 33898087-33898586 Glycine max
Glyma.13G226500 1.0kb upstream 1.0kb upstream 8434 true Chr13: 33898587-33907020 Glycine max
Glyma.13G226500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33906021-33907020 Glycine max
Glyma.13G226500 1.0kb downstream 1.0kb downstream 8434 true Chr13: 33897587-33906020 Glycine max
Glyma.13G226500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33897587-33898586 Glycine max
Glyma.13G226500 2.0kb upstream 2.0kb upstream 9434 true Chr13: 33898587-33908020 Glycine max
Glyma.13G226500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33906021-33908020 Glycine max
Glyma.13G226500 2.0kb downstream 2.0kb downstream 9434 true Chr13: 33896587-33906020 Glycine max
Glyma.13G226500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33896587-33898586 Glycine max
Glyma.13G226500 5.0kb upstream 5.0kb upstream 12434 true Chr13: 33898587-33911020 Glycine max
Glyma.13G226500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33906021-33911020 Glycine max
Glyma.13G226500 5.0kb downstream 5.0kb downstream 12434 true Chr13: 33893587-33906020 Glycine max
Glyma.13G226500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33893587-33898586 Glycine max
Glyma.13G226500 10.0kb upstream 10.0kb upstream 17434 true Chr13: 33898587-33916020 Glycine max
Glyma.13G226500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33906021-33916020 Glycine max
Glyma.13G226500 10.0kb downstream 10.0kb downstream 17434 true Chr13: 33888587-33906020 Glycine max
Glyma.13G226500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33888587-33898586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040922 5273 Angiosperm View MSA
122298982 5265 Fabidae View MSA
124064207 5270 Rosid View MSA
123751329 5271 Pentapetalae View MSA
122792829 5272 Eudicot View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07379 0.0 5.85176   Low
cufflinks 9.14443 0.0 24.6422   High
cufflinks 1.91401 0.0 5.42114   Low
cufflinks 2.05666 0.0 5.79952   Low
cufflinks 8.03584 0.0 21.5304    
cufflinks 3.07568 0.0 8.38374    
cufflinks 3.97916 0.0 10.7141    
cufflinks 11.047 0.0 30.1052   High
cufflinks 4.37569 0.0 11.7276    
cufflinks 3.376        
cufflinks 1.991        
cufflinks 3.844        
cufflinks 7.497     High  
cufflinks 10.405     High High
cufflinks 0.386       Low
cufflinks 5.076        
cufflinks 2.039        
cufflinks 3.553        
cufflinks 11.273     High High
cufflinks 4.446        
cufflinks 3.754        
cufflinks 5.741        
cufflinks 5.36        
cufflinks 1.88        
cufflinks 4.468        
cufflinks 2.292        

0 Strain