Gene : Glyma.13G229600 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  2296
Name:  ? Glyma.13G229600 Secondary Identifier:  ? PAC:30500572
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G229600 0.5kb upstream 0.5kb upstream 6009 true Chr13: 34169480-34175488 Glycine max
Glyma.13G229600 0.5kb upstream 0.5kb upstream 500 false Chr13: 34169480-34169979 Glycine max
Glyma.13G229600 0.5kb downstream 0.5kb downstream 6009 true Chr13: 34169980-34175988 Glycine max
Glyma.13G229600 0.5kb downstream 0.5kb downstream 500 false Chr13: 34175489-34175988 Glycine max
Glyma.13G229600 1.0kb upstream 1.0kb upstream 6509 true Chr13: 34168980-34175488 Glycine max
Glyma.13G229600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34168980-34169979 Glycine max
Glyma.13G229600 1.0kb downstream 1.0kb downstream 6509 true Chr13: 34169980-34176488 Glycine max
Glyma.13G229600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34175489-34176488 Glycine max
Glyma.13G229600 2.0kb upstream 2.0kb upstream 7509 true Chr13: 34167980-34175488 Glycine max
Glyma.13G229600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34167980-34169979 Glycine max
Glyma.13G229600 2.0kb downstream 2.0kb downstream 7509 true Chr13: 34169980-34177488 Glycine max
Glyma.13G229600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34175489-34177488 Glycine max
Glyma.13G229600 5.0kb upstream 5.0kb upstream 10509 true Chr13: 34164980-34175488 Glycine max
Glyma.13G229600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34164980-34169979 Glycine max
Glyma.13G229600 5.0kb downstream 5.0kb downstream 10509 true Chr13: 34169980-34180488 Glycine max
Glyma.13G229600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34175489-34180488 Glycine max
Glyma.13G229600 10.0kb upstream 10.0kb upstream 15509 true Chr13: 34159980-34175488 Glycine max
Glyma.13G229600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34159980-34169979 Glycine max
Glyma.13G229600 10.0kb downstream 10.0kb downstream 15509 true Chr13: 34169980-34185488 Glycine max
Glyma.13G229600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34175489-34185488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303714 5265 Fabidae View MSA
124073016 5270 Rosid View MSA
123747024 5271 Pentapetalae View MSA
122797594 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75945 0.0 26.4032    
cufflinks 5.51393 0.0 15.6914   Low
cufflinks 14.7165 0.0 39.3368   High
cufflinks 5.85764 0.0 16.5391    
cufflinks 8.7771 0.0 23.8318    
cufflinks 8.46772 0.0 23.1069    
cufflinks 6.68809 0.0 18.5643    
cufflinks 5.97247 0.0 16.8512    
cufflinks 6.77159 0.0 18.8181    
cufflinks 2.382       Low
cufflinks 17.398     High High
cufflinks 3.78        
cufflinks 2.975        
cufflinks 3.212        
cufflinks 8.368     High  
cufflinks 3.309        
cufflinks 5.235        
cufflinks 2.283       Low
cufflinks 2.603        
cufflinks 3.374        
cufflinks 12.823     High High
cufflinks 3.694        
cufflinks 2.845        
cufflinks 12.981     High High
cufflinks 3.075        
cufflinks 8.468     High  

0 Strain