Gene : Glyma.13G230600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  2306
Name:  ? Glyma.13G230600 Secondary Identifier:  ? PAC:30501771
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G230600 0.5kb upstream 0.5kb upstream 2559 true Chr13: 34253777-34256335 Glycine max
Glyma.13G230600 0.5kb upstream 0.5kb upstream 500 false Chr13: 34255836-34256335 Glycine max
Glyma.13G230600 0.5kb downstream 0.5kb downstream 2559 true Chr13: 34253277-34255835 Glycine max
Glyma.13G230600 0.5kb downstream 0.5kb downstream 500 false Chr13: 34253277-34253776 Glycine max
Glyma.13G230600 1.0kb upstream 1.0kb upstream 3059 true Chr13: 34253777-34256835 Glycine max
Glyma.13G230600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34255836-34256835 Glycine max
Glyma.13G230600 1.0kb downstream 1.0kb downstream 3059 true Chr13: 34252777-34255835 Glycine max
Glyma.13G230600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34252777-34253776 Glycine max
Glyma.13G230600 2.0kb upstream 2.0kb upstream 4059 true Chr13: 34253777-34257835 Glycine max
Glyma.13G230600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34255836-34257835 Glycine max
Glyma.13G230600 2.0kb downstream 2.0kb downstream 4059 true Chr13: 34251777-34255835 Glycine max
Glyma.13G230600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34251777-34253776 Glycine max
Glyma.13G230600 5.0kb upstream 5.0kb upstream 7059 true Chr13: 34253777-34260835 Glycine max
Glyma.13G230600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34255836-34260835 Glycine max
Glyma.13G230600 5.0kb downstream 5.0kb downstream 7059 true Chr13: 34248777-34255835 Glycine max
Glyma.13G230600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34248777-34253776 Glycine max
Glyma.13G230600 10.0kb upstream 10.0kb upstream 12059 true Chr13: 34253777-34265835 Glycine max
Glyma.13G230600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34255836-34265835 Glycine max
Glyma.13G230600 10.0kb downstream 10.0kb downstream 12059 true Chr13: 34243777-34255835 Glycine max
Glyma.13G230600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34243777-34253776 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301993 5265 Fabidae View MSA
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.359 0.0 134.47 High High
cufflinks 57.2378 0.0 153.337 High High
cufflinks 13.9848 0.0 39.8013   Low
cufflinks 20.6245 0.0 56.5844 High  
cufflinks 20.1818 0.0 55.4709 High  
cufflinks 17.5367 0.0 48.779    
cufflinks 29.4966 0.0 79.3498 High  
cufflinks 24.9551 0.0 67.5145 High  
cufflinks 13.5899 0.0 38.685   Low
cufflinks 15.028     High  
cufflinks 1.518       Low
cufflinks 6.4        
cufflinks 3.988        
cufflinks 4.32        
cufflinks 3.017        
cufflinks 57.363     High High
cufflinks 1.592       Low
cufflinks 7.739     High  
cufflinks 16.232     High  
cufflinks 55.532     High High
cufflinks 1.839       Low
cufflinks 48.355     High High
cufflinks 60.12     High High
cufflinks 1.838       Low
cufflinks 56.7     High High
cufflinks 1.985       Low

0 Strain