Gene : Glyma.13G224800 G. max Wm82.a2.v1
Defline:  (1 of 74) KOG4412 - 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  2248
Name:  ? Glyma.13G224800 Secondary Identifier:  ? PAC:30502318
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G224800 0.5kb upstream 0.5kb upstream 8368 true Chr13: 33748627-33756994 Glycine max
Glyma.13G224800 0.5kb upstream 0.5kb upstream 500 false Chr13: 33756495-33756994 Glycine max
Glyma.13G224800 0.5kb downstream 0.5kb downstream 8368 true Chr13: 33748127-33756494 Glycine max
Glyma.13G224800 0.5kb downstream 0.5kb downstream 500 false Chr13: 33748127-33748626 Glycine max
Glyma.13G224800 1.0kb upstream 1.0kb upstream 8868 true Chr13: 33748627-33757494 Glycine max
Glyma.13G224800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33756495-33757494 Glycine max
Glyma.13G224800 1.0kb downstream 1.0kb downstream 8868 true Chr13: 33747627-33756494 Glycine max
Glyma.13G224800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33747627-33748626 Glycine max
Glyma.13G224800 2.0kb upstream 2.0kb upstream 9868 true Chr13: 33748627-33758494 Glycine max
Glyma.13G224800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33756495-33758494 Glycine max
Glyma.13G224800 2.0kb downstream 2.0kb downstream 9868 true Chr13: 33746627-33756494 Glycine max
Glyma.13G224800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33746627-33748626 Glycine max
Glyma.13G224800 5.0kb upstream 5.0kb upstream 12868 true Chr13: 33748627-33761494 Glycine max
Glyma.13G224800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33756495-33761494 Glycine max
Glyma.13G224800 5.0kb downstream 5.0kb downstream 12868 true Chr13: 33743627-33756494 Glycine max
Glyma.13G224800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33743627-33748626 Glycine max
Glyma.13G224800 10.0kb upstream 10.0kb upstream 17868 true Chr13: 33748627-33766494 Glycine max
Glyma.13G224800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33756495-33766494 Glycine max
Glyma.13G224800 10.0kb downstream 10.0kb downstream 17868 true Chr13: 33738627-33756494 Glycine max
Glyma.13G224800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33738627-33748626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312204 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0556543 0.0 0.223006 Low Low
cufflinks 0.644637 0.0 2.8232   High
cufflinks 0.126393 0.0 0.615302 Low  
cufflinks 0.055611 0.0 0.221791 Low Low
cufflinks 0.167902 0.0 0.816614 Low  
cufflinks 0.0886684 0.0 0.348169 Low  
cufflinks 0.0843615 0.0 0.331007 Low  
cufflinks 0.265836 0.0 1.3037    
cufflinks 0.286629 0.0 1.40699    
cufflinks 0.144        
cufflinks 0.029     Low  
cufflinks 0.028     Low  
cufflinks 0.017     Low Low
cufflinks 0.004     Low Low
cufflinks 0.018     Low  
cufflinks 0.248       High
cufflinks 0.055     Low  
cufflinks 0.069     Low  
cufflinks 0.114        
cufflinks 0.46       High
cufflinks 0.029     Low  
cufflinks 0.321       High
cufflinks 0.209        
cufflinks 0.022     Low  
cufflinks 0.375       High
cufflinks 0.046     Low  

0 Strain