Gene : Glyma.13G214900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16517//PTHR16517:SF47 - TUBBY-RELATED Genomic Order:  2149
Name:  ? Glyma.13G214900 Secondary Identifier:  ? PAC:30501033
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G214900 0.5kb upstream 0.5kb upstream 5736 true Chr13: 32841656-32847391 Glycine max
Glyma.13G214900 0.5kb upstream 0.5kb upstream 500 false Chr13: 32841656-32842155 Glycine max
Glyma.13G214900 0.5kb downstream 0.5kb downstream 5736 true Chr13: 32842156-32847891 Glycine max
Glyma.13G214900 0.5kb downstream 0.5kb downstream 500 false Chr13: 32847392-32847891 Glycine max
Glyma.13G214900 1.0kb upstream 1.0kb upstream 6236 true Chr13: 32841156-32847391 Glycine max
Glyma.13G214900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32841156-32842155 Glycine max
Glyma.13G214900 1.0kb downstream 1.0kb downstream 6236 true Chr13: 32842156-32848391 Glycine max
Glyma.13G214900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32847392-32848391 Glycine max
Glyma.13G214900 2.0kb upstream 2.0kb upstream 7236 true Chr13: 32840156-32847391 Glycine max
Glyma.13G214900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32840156-32842155 Glycine max
Glyma.13G214900 2.0kb downstream 2.0kb downstream 7236 true Chr13: 32842156-32849391 Glycine max
Glyma.13G214900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32847392-32849391 Glycine max
Glyma.13G214900 5.0kb upstream 5.0kb upstream 10236 true Chr13: 32837156-32847391 Glycine max
Glyma.13G214900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32837156-32842155 Glycine max
Glyma.13G214900 5.0kb downstream 5.0kb downstream 10236 true Chr13: 32842156-32852391 Glycine max
Glyma.13G214900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32847392-32852391 Glycine max
Glyma.13G214900 10.0kb upstream 10.0kb upstream 15236 true Chr13: 32832156-32847391 Glycine max
Glyma.13G214900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32832156-32842155 Glycine max
Glyma.13G214900 10.0kb downstream 10.0kb downstream 15236 true Chr13: 32842156-32857391 Glycine max
Glyma.13G214900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32847392-32857391 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309319 5265 Fabidae View MSA
124069789 5270 Rosid View MSA
123743199 5271 Pentapetalae View MSA
122785867 5272 Eudicot View MSA
122047610 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2943 0.0 92.8046 High  
cufflinks 16.7291 0.0 58.1215    
cufflinks 27.1585 0.0 98.6855 High  
cufflinks 12.1915 0.0 44.334    
cufflinks 14.6058 0.0 45.6906    
cufflinks 8.89596 0.0 30.8584   Low
cufflinks 24.5211 0.0 78.4144 High  
cufflinks 31.3339 0.0 104.385 High High
cufflinks 17.4441 0.0 61.1431    
cufflinks 2.767        
cufflinks 5.167        
cufflinks 3.952        
cufflinks 1.942       Low
cufflinks 2.182       Low
cufflinks 8.911     High High
cufflinks 4.503        
cufflinks 1.443       Low
cufflinks 2.769        
cufflinks 5.17        
cufflinks 5.15        
cufflinks 5.617        
cufflinks 5.025        
cufflinks 4.002        
cufflinks 5.011        
cufflinks 5.068        
cufflinks 2.854        

0 Strain