Gene : Glyma.13G216300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  2163
Name:  ? Glyma.13G216300 Secondary Identifier:  ? PAC:30502719
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G216300 0.5kb upstream 0.5kb upstream 809 true Chr13: 32952764-32953572 Glycine max
Glyma.13G216300 0.5kb upstream 0.5kb upstream 500 false Chr13: 32953073-32953572 Glycine max
Glyma.13G216300 0.5kb downstream 0.5kb downstream 809 true Chr13: 32952264-32953072 Glycine max
Glyma.13G216300 0.5kb downstream 0.5kb downstream 500 false Chr13: 32952264-32952763 Glycine max
Glyma.13G216300 1.0kb upstream 1.0kb upstream 1309 true Chr13: 32952764-32954072 Glycine max
Glyma.13G216300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32953073-32954072 Glycine max
Glyma.13G216300 1.0kb downstream 1.0kb downstream 1309 true Chr13: 32951764-32953072 Glycine max
Glyma.13G216300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32951764-32952763 Glycine max
Glyma.13G216300 2.0kb upstream 2.0kb upstream 2309 true Chr13: 32952764-32955072 Glycine max
Glyma.13G216300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32953073-32955072 Glycine max
Glyma.13G216300 2.0kb downstream 2.0kb downstream 2309 true Chr13: 32950764-32953072 Glycine max
Glyma.13G216300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32950764-32952763 Glycine max
Glyma.13G216300 5.0kb upstream 5.0kb upstream 5309 true Chr13: 32952764-32958072 Glycine max
Glyma.13G216300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32953073-32958072 Glycine max
Glyma.13G216300 5.0kb downstream 5.0kb downstream 5309 true Chr13: 32947764-32953072 Glycine max
Glyma.13G216300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32947764-32952763 Glycine max
Glyma.13G216300 10.0kb upstream 10.0kb upstream 10309 true Chr13: 32952764-32963072 Glycine max
Glyma.13G216300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32953073-32963072 Glycine max
Glyma.13G216300 10.0kb downstream 10.0kb downstream 10309 true Chr13: 32942764-32953072 Glycine max
Glyma.13G216300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32942764-32952763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310406 5265 Fabidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.85282 0.0 7.20941    
cufflinks 0.419872 0.0 1.74113    
cufflinks 2.97215 0.0 11.3137   High
cufflinks 0.301176 0.0 1.27511    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.051     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.487       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.684        
cufflinks 0.711        
cufflinks 0.204        
cufflinks 0.096     Low Low
cufflinks 1.866        
cufflinks 0.148        
cufflinks 1.832        
cufflinks 0.213        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.925       High
cufflinks 0.124        

0 Strain