Gene : Glyma.13G217000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  2170
Name:  ? Glyma.13G217000 Secondary Identifier:  ? PAC:30502914
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G217000 0.5kb upstream 0.5kb upstream 7755 true Chr13: 32995492-33003246 Glycine max
Glyma.13G217000 0.5kb upstream 0.5kb upstream 500 false Chr13: 33002747-33003246 Glycine max
Glyma.13G217000 0.5kb downstream 0.5kb downstream 7755 true Chr13: 32994992-33002746 Glycine max
Glyma.13G217000 0.5kb downstream 0.5kb downstream 500 false Chr13: 32994992-32995491 Glycine max
Glyma.13G217000 1.0kb upstream 1.0kb upstream 8255 true Chr13: 32995492-33003746 Glycine max
Glyma.13G217000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33002747-33003746 Glycine max
Glyma.13G217000 1.0kb downstream 1.0kb downstream 8255 true Chr13: 32994492-33002746 Glycine max
Glyma.13G217000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32994492-32995491 Glycine max
Glyma.13G217000 2.0kb upstream 2.0kb upstream 9255 true Chr13: 32995492-33004746 Glycine max
Glyma.13G217000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33002747-33004746 Glycine max
Glyma.13G217000 2.0kb downstream 2.0kb downstream 9255 true Chr13: 32993492-33002746 Glycine max
Glyma.13G217000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32993492-32995491 Glycine max
Glyma.13G217000 5.0kb upstream 5.0kb upstream 12255 true Chr13: 32995492-33007746 Glycine max
Glyma.13G217000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33002747-33007746 Glycine max
Glyma.13G217000 5.0kb downstream 5.0kb downstream 12255 true Chr13: 32990492-33002746 Glycine max
Glyma.13G217000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32990492-32995491 Glycine max
Glyma.13G217000 10.0kb upstream 10.0kb upstream 17255 true Chr13: 32995492-33012746 Glycine max
Glyma.13G217000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33002747-33012746 Glycine max
Glyma.13G217000 10.0kb downstream 10.0kb downstream 17255 true Chr13: 32985492-33002746 Glycine max
Glyma.13G217000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32985492-32995491 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297182 5265 Fabidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71565 0.0 10.5081    
cufflinks 5.07192 0.0 25.9373    
cufflinks 1.77742 0.0 11.8996   Low
cufflinks 5.28923 0.0 25.3634    
cufflinks 4.95164 0.0 24.0894    
cufflinks 3.36308 0.0 17.6364    
cufflinks 6.44903 0.0 21.1218   High
cufflinks 2.88475 0.0 10.9154    
cufflinks 2.9114 0.0 11.0029    
cufflinks 0.727        
cufflinks 0.114       Low
cufflinks 0.553        
cufflinks 0.695        
cufflinks 0.831        
cufflinks 0.366        
cufflinks 0.564        
cufflinks 0.298        
cufflinks 0.952       High
cufflinks 0.991       High
cufflinks 0.468        
cufflinks 0.148       Low
cufflinks 0.461        
cufflinks 0.684        
cufflinks 0.101       Low
cufflinks 0.479        
cufflinks 0.299        

0 Strain