Gene : Glyma.13G219900 G. max Wm82.a2.v1
Defline:  (1 of 56) PF03634 - TCP family transcription factor (TCP) Genomic Order:  2199
Name:  ? Glyma.13G219900 Secondary Identifier:  ? PAC:30501669
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G219900 0.5kb upstream 0.5kb upstream 10874 true Chr13: 33290348-33301221 Glycine max
Glyma.13G219900 0.5kb upstream 0.5kb upstream 500 false Chr13: 33300722-33301221 Glycine max
Glyma.13G219900 0.5kb downstream 0.5kb downstream 10874 true Chr13: 33289848-33300721 Glycine max
Glyma.13G219900 0.5kb downstream 0.5kb downstream 500 false Chr13: 33289848-33290347 Glycine max
Glyma.13G219900 1.0kb upstream 1.0kb upstream 11374 true Chr13: 33290348-33301721 Glycine max
Glyma.13G219900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33300722-33301721 Glycine max
Glyma.13G219900 1.0kb downstream 1.0kb downstream 11374 true Chr13: 33289348-33300721 Glycine max
Glyma.13G219900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33289348-33290347 Glycine max
Glyma.13G219900 2.0kb upstream 2.0kb upstream 12374 true Chr13: 33290348-33302721 Glycine max
Glyma.13G219900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33300722-33302721 Glycine max
Glyma.13G219900 2.0kb downstream 2.0kb downstream 12374 true Chr13: 33288348-33300721 Glycine max
Glyma.13G219900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33288348-33290347 Glycine max
Glyma.13G219900 5.0kb upstream 5.0kb upstream 15374 true Chr13: 33290348-33305721 Glycine max
Glyma.13G219900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33300722-33305721 Glycine max
Glyma.13G219900 5.0kb downstream 5.0kb downstream 15374 true Chr13: 33285348-33300721 Glycine max
Glyma.13G219900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33285348-33290347 Glycine max
Glyma.13G219900 10.0kb upstream 10.0kb upstream 20374 true Chr13: 33290348-33310721 Glycine max
Glyma.13G219900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33300722-33310721 Glycine max
Glyma.13G219900 10.0kb downstream 10.0kb downstream 20374 true Chr13: 33280348-33300721 Glycine max
Glyma.13G219900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33280348-33290347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307262 5265 Fabidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3346 0.0 57.6799   High
cufflinks 15.2497 0.0 58.2976   High
cufflinks 6.36756 0.0 22.7413    
cufflinks 11.6588 0.0 40.819    
cufflinks 1.56358 0.0 6.70525   Low
cufflinks 1.47383 0.0 7.85541   Low
cufflinks 12.4305 0.0 43.5042    
cufflinks 1.59154 0.0 8.36187   Low
cufflinks 5.41637 0.0 16.7355    
cufflinks 0.223        
cufflinks 0.058       Low
cufflinks 0.931        
cufflinks 0.572        
cufflinks 0.014     Low Low
cufflinks 0.474        
cufflinks 2.192        
cufflinks 0.355        
cufflinks 1.292        
cufflinks 1.919        
cufflinks 2.128        
cufflinks 0.073       Low
cufflinks 2.432       High
cufflinks 2.828       High
cufflinks 0.154        
cufflinks 2.125        
cufflinks 0.125        

0 Strain