Gene : Glyma.13G207900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21000 - DIHYDROXY-ACID DEHYDRATASE DAD Genomic Order:  2079
Name:  ? Glyma.13G207900 Secondary Identifier:  ? PAC:30500221
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax VALSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G207900 0.5kb upstream 0.5kb upstream 7755 true Chr13: 32155414-32163168 Glycine max
Glyma.13G207900 0.5kb upstream 0.5kb upstream 500 false Chr13: 32155414-32155913 Glycine max
Glyma.13G207900 0.5kb downstream 0.5kb downstream 7755 true Chr13: 32155914-32163668 Glycine max
Glyma.13G207900 0.5kb downstream 0.5kb downstream 500 false Chr13: 32163169-32163668 Glycine max
Glyma.13G207900 1.0kb upstream 1.0kb upstream 8255 true Chr13: 32154914-32163168 Glycine max
Glyma.13G207900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32154914-32155913 Glycine max
Glyma.13G207900 1.0kb downstream 1.0kb downstream 8255 true Chr13: 32155914-32164168 Glycine max
Glyma.13G207900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32163169-32164168 Glycine max
Glyma.13G207900 2.0kb upstream 2.0kb upstream 9255 true Chr13: 32153914-32163168 Glycine max
Glyma.13G207900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32153914-32155913 Glycine max
Glyma.13G207900 2.0kb downstream 2.0kb downstream 9255 true Chr13: 32155914-32165168 Glycine max
Glyma.13G207900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32163169-32165168 Glycine max
Glyma.13G207900 5.0kb upstream 5.0kb upstream 12255 true Chr13: 32150914-32163168 Glycine max
Glyma.13G207900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32150914-32155913 Glycine max
Glyma.13G207900 5.0kb downstream 5.0kb downstream 12255 true Chr13: 32155914-32168168 Glycine max
Glyma.13G207900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32163169-32168168 Glycine max
Glyma.13G207900 10.0kb upstream 10.0kb upstream 17255 true Chr13: 32145914-32163168 Glycine max
Glyma.13G207900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32145914-32155913 Glycine max
Glyma.13G207900 10.0kb downstream 10.0kb downstream 17255 true Chr13: 32155914-32173168 Glycine max
Glyma.13G207900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32163169-32173168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301834 5265 Fabidae View MSA
124066376 5270 Rosid View MSA
123742145 5271 Pentapetalae View MSA
122787783 5272 Eudicot View MSA
122041651 5273 Angiosperm View MSA
121345047 5274 Embryophyte View MSA
123424997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7372 0.0 67.2078 High  
cufflinks 23.7716 0.0 64.3488 High  
cufflinks 14.129 0.0 37.6951   Low
cufflinks 33.4854 0.0 93.1574 High High
cufflinks 32.5797 0.0 90.5862 High  
cufflinks 12.2216 0.0 32.6281   Low
cufflinks 30.5083 0.0 84.2211 High  
cufflinks 22.1686 0.0 59.8219 High  
cufflinks 24.0992 0.0 65.3438 High  
cufflinks 7.996     High  
cufflinks 2.066       Low
cufflinks 6.929        
cufflinks 11.389     High High
cufflinks 15.786     High High
cufflinks 6.884     High  
cufflinks 9.303     High  
cufflinks 2.581       Low
cufflinks 6.347        
cufflinks 9.318     High  
cufflinks 6.697        
cufflinks 3.83        
cufflinks 6.707        
cufflinks 9.371     High  
cufflinks 1.647       Low
cufflinks 8.234     High  
cufflinks 3.324        

0 Strain