Gene : Glyma.13G210800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2108
Name:  ? Glyma.13G210800 Secondary Identifier:  ? PAC:30500196
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLNSYN-PWY Glycine max pathologic  
Gmax PWY-3282 Glycine max pathologic  
Gmax PWY-381 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  
Gmax PWY-6963 Glycine max pathologic  
Gmax PWY-6964 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G210800 0.5kb upstream 0.5kb upstream 6437 true Chr13: 32457878-32464314 Glycine max
Glyma.13G210800 0.5kb upstream 0.5kb upstream 500 false Chr13: 32457878-32458377 Glycine max
Glyma.13G210800 0.5kb downstream 0.5kb downstream 6437 true Chr13: 32458378-32464814 Glycine max
Glyma.13G210800 0.5kb downstream 0.5kb downstream 500 false Chr13: 32464315-32464814 Glycine max
Glyma.13G210800 1.0kb upstream 1.0kb upstream 6937 true Chr13: 32457378-32464314 Glycine max
Glyma.13G210800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32457378-32458377 Glycine max
Glyma.13G210800 1.0kb downstream 1.0kb downstream 6937 true Chr13: 32458378-32465314 Glycine max
Glyma.13G210800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32464315-32465314 Glycine max
Glyma.13G210800 2.0kb upstream 2.0kb upstream 7937 true Chr13: 32456378-32464314 Glycine max
Glyma.13G210800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32456378-32458377 Glycine max
Glyma.13G210800 2.0kb downstream 2.0kb downstream 7937 true Chr13: 32458378-32466314 Glycine max
Glyma.13G210800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32464315-32466314 Glycine max
Glyma.13G210800 5.0kb upstream 5.0kb upstream 10937 true Chr13: 32453378-32464314 Glycine max
Glyma.13G210800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32453378-32458377 Glycine max
Glyma.13G210800 5.0kb downstream 5.0kb downstream 10937 true Chr13: 32458378-32469314 Glycine max
Glyma.13G210800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32464315-32469314 Glycine max
Glyma.13G210800 10.0kb upstream 10.0kb upstream 15937 true Chr13: 32448378-32464314 Glycine max
Glyma.13G210800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32448378-32458377 Glycine max
Glyma.13G210800 10.0kb downstream 10.0kb downstream 15937 true Chr13: 32458378-32474314 Glycine max
Glyma.13G210800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32464315-32474314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301518 5265 Fabidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 156.832 0.0 1033.5 High High
cufflinks 128.879 0.0 742.201 High High
cufflinks 24.0944 0.0 84.7756 High  
cufflinks 42.9977 0.0 189.76 High  
cufflinks 17.822 0.0 61.1543    
cufflinks 9.85334 0.0 34.6588   Low
cufflinks 17.1786 0.0 58.8414    
cufflinks 31.3809 0.0 113.654 High  
cufflinks 14.9585 0.0 51.2987    
cufflinks 8.467     High  
cufflinks 0.09       Low
cufflinks 4.736        
cufflinks 0.727        
cufflinks 1.218        
cufflinks 2.616        
cufflinks 70.331     High High
cufflinks 0.236       Low
cufflinks 7.507     High  
cufflinks 11.872     High  
cufflinks 77.784     High High
cufflinks 0.157       Low
cufflinks 66.613     High High
cufflinks 45.111     High High
cufflinks 0.097       Low
cufflinks 76.304     High High
cufflinks 0.457        

0 Strain