Gene : Glyma.13G247400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12549:SF13 - PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN Genomic Order:  2474
Name:  ? Glyma.13G247400 Secondary Identifier:  ? PAC:30501960
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G247400 0.5kb upstream 0.5kb upstream 6379 true Chr13: 35586790-35593168 Glycine max
Glyma.13G247400 0.5kb upstream 0.5kb upstream 500 false Chr13: 35592669-35593168 Glycine max
Glyma.13G247400 0.5kb downstream 0.5kb downstream 6379 true Chr13: 35586290-35592668 Glycine max
Glyma.13G247400 0.5kb downstream 0.5kb downstream 500 false Chr13: 35586290-35586789 Glycine max
Glyma.13G247400 1.0kb upstream 1.0kb upstream 6879 true Chr13: 35586790-35593668 Glycine max
Glyma.13G247400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35592669-35593668 Glycine max
Glyma.13G247400 1.0kb downstream 1.0kb downstream 6879 true Chr13: 35585790-35592668 Glycine max
Glyma.13G247400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35585790-35586789 Glycine max
Glyma.13G247400 2.0kb upstream 2.0kb upstream 7879 true Chr13: 35586790-35594668 Glycine max
Glyma.13G247400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35592669-35594668 Glycine max
Glyma.13G247400 2.0kb downstream 2.0kb downstream 7879 true Chr13: 35584790-35592668 Glycine max
Glyma.13G247400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35584790-35586789 Glycine max
Glyma.13G247400 5.0kb upstream 5.0kb upstream 10879 true Chr13: 35586790-35597668 Glycine max
Glyma.13G247400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35592669-35597668 Glycine max
Glyma.13G247400 5.0kb downstream 5.0kb downstream 10879 true Chr13: 35581790-35592668 Glycine max
Glyma.13G247400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35581790-35586789 Glycine max
Glyma.13G247400 10.0kb upstream 10.0kb upstream 15879 true Chr13: 35586790-35602668 Glycine max
Glyma.13G247400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35592669-35602668 Glycine max
Glyma.13G247400 10.0kb downstream 10.0kb downstream 15879 true Chr13: 35576790-35592668 Glycine max
Glyma.13G247400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35576790-35586789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780008 5273 Angiosperm View MSA
122311140 5265 Fabidae View MSA
124050384 5270 Rosid View MSA
123744694 5271 Pentapetalae View MSA
122771220 5272 Eudicot View MSA
121051643 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25469 0.0 5.48671    
cufflinks 1.50323 0.0 6.20824    
cufflinks 0.980777 0.0 4.62289    
cufflinks 1.1087 0.0 5.01463    
cufflinks 0.95677 0.0 4.65627    
cufflinks 0.866445 0.0 4.24484    
cufflinks 2.29311 0.0 8.4053   High
cufflinks 0.974962 0.0 4.60928    
cufflinks 1.07541 0.0 3.84888    
cufflinks 0.483        
cufflinks 0.747        
cufflinks 0.505        
cufflinks 0.507        
cufflinks 0.462        
cufflinks 0.389       Low
cufflinks 1.313       High
cufflinks 0.2       Low
cufflinks 0.712        
cufflinks 0.682        
cufflinks 1.655       High
cufflinks 0.73        
cufflinks 1.364       High
cufflinks 0.917        
cufflinks 0.667        
cufflinks 1.465       High
cufflinks 0.441        

0 Strain