Gene : Glyma.13G249400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  2494
Name:  ? Glyma.13G249400 Secondary Identifier:  ? PAC:30502194
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G249400 0.5kb upstream 0.5kb upstream 2334 true Chr13: 35718791-35721124 Glycine max
Glyma.13G249400 0.5kb upstream 0.5kb upstream 500 false Chr13: 35718791-35719290 Glycine max
Glyma.13G249400 0.5kb downstream 0.5kb downstream 2334 true Chr13: 35719291-35721624 Glycine max
Glyma.13G249400 0.5kb downstream 0.5kb downstream 500 false Chr13: 35721125-35721624 Glycine max
Glyma.13G249400 1.0kb upstream 1.0kb upstream 2834 true Chr13: 35718291-35721124 Glycine max
Glyma.13G249400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35718291-35719290 Glycine max
Glyma.13G249400 1.0kb downstream 1.0kb downstream 2834 true Chr13: 35719291-35722124 Glycine max
Glyma.13G249400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35721125-35722124 Glycine max
Glyma.13G249400 2.0kb upstream 2.0kb upstream 3834 true Chr13: 35717291-35721124 Glycine max
Glyma.13G249400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35717291-35719290 Glycine max
Glyma.13G249400 2.0kb downstream 2.0kb downstream 3834 true Chr13: 35719291-35723124 Glycine max
Glyma.13G249400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35721125-35723124 Glycine max
Glyma.13G249400 5.0kb upstream 5.0kb upstream 6834 true Chr13: 35714291-35721124 Glycine max
Glyma.13G249400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35714291-35719290 Glycine max
Glyma.13G249400 5.0kb downstream 5.0kb downstream 6834 true Chr13: 35719291-35726124 Glycine max
Glyma.13G249400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35721125-35726124 Glycine max
Glyma.13G249400 10.0kb upstream 10.0kb upstream 11834 true Chr13: 35709291-35721124 Glycine max
Glyma.13G249400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35709291-35719290 Glycine max
Glyma.13G249400 10.0kb downstream 10.0kb downstream 11834 true Chr13: 35719291-35731124 Glycine max
Glyma.13G249400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35721125-35731124 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298887 5265 Fabidae View MSA
124036632 5270 Rosid View MSA
123609926 5271 Pentapetalae View MSA
122644564 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.386 0.0 33.4874   High
cufflinks 0.534446 0.0 1.98494   Low
cufflinks 5.13345 0.0 15.2045    
cufflinks 3.09216 0.0 9.78218    
cufflinks 5.64061 0.0 16.2784    
cufflinks 2.52419 0.0 8.17167    
cufflinks 1.4755 0.0 5.09782    
cufflinks 3.03291 0.0 9.61182    
cufflinks 4.41083 0.0 13.2003    
cufflinks 0.663       Low
cufflinks 3.981        
cufflinks 1.753        
cufflinks 1.534        
cufflinks 0.541       Low
cufflinks 1.673        
cufflinks 3.545        
cufflinks 1.188        
cufflinks 1.193        
cufflinks 0.584       Low
cufflinks 4.183        
cufflinks 5.629       High
cufflinks 2.968        
cufflinks 1.102        
cufflinks 6.583     High High
cufflinks 3.607        
cufflinks 4.381        

0 Strain