Gene : Glyma.13G243700 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  2437
Name:  ? Glyma.13G243700 Secondary Identifier:  ? PAC:30501972
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G243700 0.5kb upstream 0.5kb upstream 5277 true Chr13: 35311687-35316963 Glycine max
Glyma.13G243700 0.5kb upstream 0.5kb upstream 500 false Chr13: 35311687-35312186 Glycine max
Glyma.13G243700 0.5kb downstream 0.5kb downstream 5277 true Chr13: 35312187-35317463 Glycine max
Glyma.13G243700 0.5kb downstream 0.5kb downstream 500 false Chr13: 35316964-35317463 Glycine max
Glyma.13G243700 1.0kb upstream 1.0kb upstream 5777 true Chr13: 35311187-35316963 Glycine max
Glyma.13G243700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35311187-35312186 Glycine max
Glyma.13G243700 1.0kb downstream 1.0kb downstream 5777 true Chr13: 35312187-35317963 Glycine max
Glyma.13G243700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35316964-35317963 Glycine max
Glyma.13G243700 2.0kb upstream 2.0kb upstream 6777 true Chr13: 35310187-35316963 Glycine max
Glyma.13G243700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35310187-35312186 Glycine max
Glyma.13G243700 2.0kb downstream 2.0kb downstream 6777 true Chr13: 35312187-35318963 Glycine max
Glyma.13G243700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35316964-35318963 Glycine max
Glyma.13G243700 5.0kb upstream 5.0kb upstream 9777 true Chr13: 35307187-35316963 Glycine max
Glyma.13G243700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35307187-35312186 Glycine max
Glyma.13G243700 5.0kb downstream 5.0kb downstream 9777 true Chr13: 35312187-35321963 Glycine max
Glyma.13G243700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35316964-35321963 Glycine max
Glyma.13G243700 10.0kb upstream 10.0kb upstream 14777 true Chr13: 35302187-35316963 Glycine max
Glyma.13G243700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35302187-35312186 Glycine max
Glyma.13G243700 10.0kb downstream 10.0kb downstream 14777 true Chr13: 35312187-35326963 Glycine max
Glyma.13G243700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35316964-35326963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314976 5265 Fabidae View MSA
124050830 5270 Rosid View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7445 0.0 54.1457    
cufflinks 17.6768 0.0 60.1651    
cufflinks 18.7224 0.0 63.6973    
cufflinks 16.9282 0.0 57.665    
cufflinks 15.4401 0.0 52.8453   Low
cufflinks 21.81 0.0 81.9171   High
cufflinks 15.2984 0.0 52.5415   Low
cufflinks 19.0151 0.0 71.6519    
cufflinks 17.5512 0.0 59.7237    
cufflinks 1.921        
cufflinks 1.599       Low
cufflinks 1.72        
cufflinks 2.143        
cufflinks 2.421        
cufflinks 1.807        
cufflinks 2.788       High
cufflinks 1.336       Low
cufflinks 2.093        
cufflinks 2.048        
cufflinks 2.783       High
cufflinks 1.669        
cufflinks 2.854       High
cufflinks 2.417        
cufflinks 1.849        
cufflinks 2.821       High
cufflinks 1.781        

0 Strain