Gene : Glyma.13G236600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2366
Name:  ? Glyma.13G236600 Secondary Identifier:  ? PAC:30500621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G236600 0.5kb upstream 0.5kb upstream 992 true Chr13: 34699686-34700677 Glycine max
Glyma.13G236600 0.5kb upstream 0.5kb upstream 500 false Chr13: 34700178-34700677 Glycine max
Glyma.13G236600 0.5kb downstream 0.5kb downstream 992 true Chr13: 34699186-34700177 Glycine max
Glyma.13G236600 0.5kb downstream 0.5kb downstream 500 false Chr13: 34699186-34699685 Glycine max
Glyma.13G236600 1.0kb upstream 1.0kb upstream 1492 true Chr13: 34699686-34701177 Glycine max
Glyma.13G236600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34700178-34701177 Glycine max
Glyma.13G236600 1.0kb downstream 1.0kb downstream 1492 true Chr13: 34698686-34700177 Glycine max
Glyma.13G236600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34698686-34699685 Glycine max
Glyma.13G236600 2.0kb upstream 2.0kb upstream 2492 true Chr13: 34699686-34702177 Glycine max
Glyma.13G236600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34700178-34702177 Glycine max
Glyma.13G236600 2.0kb downstream 2.0kb downstream 2492 true Chr13: 34697686-34700177 Glycine max
Glyma.13G236600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34697686-34699685 Glycine max
Glyma.13G236600 5.0kb upstream 5.0kb upstream 5492 true Chr13: 34699686-34705177 Glycine max
Glyma.13G236600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34700178-34705177 Glycine max
Glyma.13G236600 5.0kb downstream 5.0kb downstream 5492 true Chr13: 34694686-34700177 Glycine max
Glyma.13G236600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34694686-34699685 Glycine max
Glyma.13G236600 10.0kb upstream 10.0kb upstream 10492 true Chr13: 34699686-34710177 Glycine max
Glyma.13G236600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34700178-34710177 Glycine max
Glyma.13G236600 10.0kb downstream 10.0kb downstream 10492 true Chr13: 34689686-34700177 Glycine max
Glyma.13G236600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34689686-34699685 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306015 5265 Fabidae View MSA
124064356 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.57173 0.0 2.25541   Low
cufflinks 16.3087 0.0 50.5286    
cufflinks 20.3751 0.0 62.1039 High High
cufflinks 2.84018 0.0 10.473    
cufflinks 13.1409 0.0 41.24    
cufflinks 6.40441 0.0 22.2141    
cufflinks 3.75223 0.0 13.5407    
cufflinks 2.09604 0.0 7.83006    
cufflinks 14.2993 0.0 44.8348    
cufflinks 0.709       Low
cufflinks 50.121     High  
cufflinks 15.567     High  
cufflinks 6.921        
cufflinks 1.633        
cufflinks 123.627     High High
cufflinks 2.142        
cufflinks 131.658     High High
cufflinks 8.879     High  
cufflinks 22.162     High  
cufflinks 0.895       Low
cufflinks 50.343     High  
cufflinks 0.836       Low
cufflinks 2.754        
cufflinks 24.288     High  
cufflinks 0.782       Low
cufflinks 74.511     High High

0 Strain