Gene : Glyma.13G236800 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  2368
Name:  ? Glyma.13G236800 Secondary Identifier:  ? PAC:30505610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G236800 0.5kb upstream 0.5kb upstream 14813 true Chr13: 34714628-34729440 Glycine max
Glyma.13G236800 0.5kb upstream 0.5kb upstream 500 false Chr13: 34714628-34715127 Glycine max
Glyma.13G236800 0.5kb downstream 0.5kb downstream 14813 true Chr13: 34715128-34729940 Glycine max
Glyma.13G236800 0.5kb downstream 0.5kb downstream 500 false Chr13: 34729441-34729940 Glycine max
Glyma.13G236800 1.0kb upstream 1.0kb upstream 15313 true Chr13: 34714128-34729440 Glycine max
Glyma.13G236800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34714128-34715127 Glycine max
Glyma.13G236800 1.0kb downstream 1.0kb downstream 15313 true Chr13: 34715128-34730440 Glycine max
Glyma.13G236800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34729441-34730440 Glycine max
Glyma.13G236800 2.0kb upstream 2.0kb upstream 16313 true Chr13: 34713128-34729440 Glycine max
Glyma.13G236800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34713128-34715127 Glycine max
Glyma.13G236800 2.0kb downstream 2.0kb downstream 16313 true Chr13: 34715128-34731440 Glycine max
Glyma.13G236800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34729441-34731440 Glycine max
Glyma.13G236800 5.0kb upstream 5.0kb upstream 19313 true Chr13: 34710128-34729440 Glycine max
Glyma.13G236800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34710128-34715127 Glycine max
Glyma.13G236800 5.0kb downstream 5.0kb downstream 19313 true Chr13: 34715128-34734440 Glycine max
Glyma.13G236800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34729441-34734440 Glycine max
Glyma.13G236800 10.0kb upstream 10.0kb upstream 24313 true Chr13: 34705128-34729440 Glycine max
Glyma.13G236800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34705128-34715127 Glycine max
Glyma.13G236800 10.0kb downstream 10.0kb downstream 24313 true Chr13: 34715128-34739440 Glycine max
Glyma.13G236800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34729441-34739440 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304638 5265 Fabidae View MSA
124062479 5270 Rosid View MSA
123743677 5271 Pentapetalae View MSA
122786281 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.25401 0.0 12.0359    
cufflinks 5.08605 0.0 17.7143   High
cufflinks 2.94789 0.0 9.53909    
cufflinks 4.17981 0.0 14.8423    
cufflinks 2.77374 0.0 10.6656   Low
cufflinks 3.05646 0.0 9.92325    
cufflinks 5.88776 0.0 20.2582   High
cufflinks 3.94118 0.0 14.1056    
cufflinks 3.89493 0.0 12.164    
cufflinks 0.801        
cufflinks 0.61       Low
cufflinks 0.954        
cufflinks 0.686        
cufflinks 0.823        
cufflinks 1.053       High
cufflinks 0.89        
cufflinks 0.701        
cufflinks 0.995        
cufflinks 1.205       High
cufflinks 0.945        
cufflinks 0.627       Low
cufflinks 0.897        
cufflinks 0.902        
cufflinks 0.566       Low
cufflinks 0.902        
cufflinks 0.787        

0 Strain