Gene : Glyma.13G277800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11886//PTHR11886:SF49 - DYNEIN LIGHT CHAIN Genomic Order:  2778
Name:  ? Glyma.13G277800 Secondary Identifier:  ? PAC:30502887
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G277800 0.5kb upstream 0.5kb upstream 2178 true Chr13: 37899444-37901621 Glycine max
Glyma.13G277800 0.5kb upstream 0.5kb upstream 500 false Chr13: 37901122-37901621 Glycine max
Glyma.13G277800 0.5kb downstream 0.5kb downstream 2178 true Chr13: 37898944-37901121 Glycine max
Glyma.13G277800 0.5kb downstream 0.5kb downstream 500 false Chr13: 37898944-37899443 Glycine max
Glyma.13G277800 1.0kb upstream 1.0kb upstream 2678 true Chr13: 37899444-37902121 Glycine max
Glyma.13G277800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37901122-37902121 Glycine max
Glyma.13G277800 1.0kb downstream 1.0kb downstream 2678 true Chr13: 37898444-37901121 Glycine max
Glyma.13G277800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37898444-37899443 Glycine max
Glyma.13G277800 2.0kb upstream 2.0kb upstream 3678 true Chr13: 37899444-37903121 Glycine max
Glyma.13G277800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37901122-37903121 Glycine max
Glyma.13G277800 2.0kb downstream 2.0kb downstream 3678 true Chr13: 37897444-37901121 Glycine max
Glyma.13G277800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37897444-37899443 Glycine max
Glyma.13G277800 5.0kb upstream 5.0kb upstream 6678 true Chr13: 37899444-37906121 Glycine max
Glyma.13G277800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37901122-37906121 Glycine max
Glyma.13G277800 5.0kb downstream 5.0kb downstream 6678 true Chr13: 37894444-37901121 Glycine max
Glyma.13G277800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37894444-37899443 Glycine max
Glyma.13G277800 10.0kb upstream 10.0kb upstream 11678 true Chr13: 37899444-37911121 Glycine max
Glyma.13G277800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37901122-37911121 Glycine max
Glyma.13G277800 10.0kb downstream 10.0kb downstream 11678 true Chr13: 37889444-37901121 Glycine max
Glyma.13G277800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37889444-37899443 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312366 5265 Fabidae View MSA
124072006 5270 Rosid View MSA
123749620 5271 Pentapetalae View MSA
122794376 5272 Eudicot View MSA
122048916 5273 Angiosperm View MSA
121352078 5274 Embryophyte View MSA
123382526 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91655 0.0 6.98713   High
cufflinks 0.802858 0.0 3.0513    
cufflinks 3.76183 0.0 13.031   High
cufflinks 0.17394 0.0 0.702065 Low  
cufflinks 0.580185 0.0 2.23684    
cufflinks 0.202475 0.0 0.812827 Low  
cufflinks 0.186622 0.0 0.751054 Low  
cufflinks 0.0350208 0.0 0.158503 Low Low
cufflinks 0.212911 0.0 0.852388 Low  
cufflinks 0.077     Low  
cufflinks 0.123        
cufflinks 0.643       High
cufflinks 0.07     Low  
cufflinks 0.011     Low Low
cufflinks 0.14        
cufflinks 0.167        
cufflinks 0.236        
cufflinks 0.096     Low  
cufflinks 0.3        
cufflinks 0.136        
cufflinks 0.025     Low Low
cufflinks 0.491       High
cufflinks 0.365        
cufflinks 0.285        
cufflinks 0.103        
cufflinks 0.229        

0 Strain