Gene : Glyma.13G280200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23410 - RIBOSOMAL PROTEIN L5-RELATED Genomic Order:  2802
Name:  ? Glyma.13G280200 Secondary Identifier:  ? PAC:30503430
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G280200 0.5kb upstream 0.5kb upstream 3405 true Chr13: 38162711-38166115 Glycine max
Glyma.13G280200 0.5kb upstream 0.5kb upstream 500 false Chr13: 38162711-38163210 Glycine max
Glyma.13G280200 0.5kb downstream 0.5kb downstream 3405 true Chr13: 38163211-38166615 Glycine max
Glyma.13G280200 0.5kb downstream 0.5kb downstream 500 false Chr13: 38166116-38166615 Glycine max
Glyma.13G280200 1.0kb upstream 1.0kb upstream 3905 true Chr13: 38162211-38166115 Glycine max
Glyma.13G280200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 38162211-38163210 Glycine max
Glyma.13G280200 1.0kb downstream 1.0kb downstream 3905 true Chr13: 38163211-38167115 Glycine max
Glyma.13G280200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 38166116-38167115 Glycine max
Glyma.13G280200 2.0kb upstream 2.0kb upstream 4905 true Chr13: 38161211-38166115 Glycine max
Glyma.13G280200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 38161211-38163210 Glycine max
Glyma.13G280200 2.0kb downstream 2.0kb downstream 4905 true Chr13: 38163211-38168115 Glycine max
Glyma.13G280200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 38166116-38168115 Glycine max
Glyma.13G280200 5.0kb upstream 5.0kb upstream 7905 true Chr13: 38158211-38166115 Glycine max
Glyma.13G280200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 38158211-38163210 Glycine max
Glyma.13G280200 5.0kb downstream 5.0kb downstream 7905 true Chr13: 38163211-38171115 Glycine max
Glyma.13G280200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 38166116-38171115 Glycine max
Glyma.13G280200 10.0kb upstream 10.0kb upstream 12905 true Chr13: 38153211-38166115 Glycine max
Glyma.13G280200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 38153211-38163210 Glycine max
Glyma.13G280200 10.0kb downstream 10.0kb downstream 12905 true Chr13: 38163211-38176115 Glycine max
Glyma.13G280200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 38166116-38176115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312221 5265 Fabidae View MSA
124061233 5270 Rosid View MSA
123751479 5271 Pentapetalae View MSA
122787634 5272 Eudicot View MSA
122045073 5273 Angiosperm View MSA
121347703 5274 Embryophyte View MSA
123424766 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 112.051 0.0 524.125 High  
cufflinks 94.6372 0.0 414.641 High  
cufflinks 66.4786 0.0 294.127 High Low
cufflinks 80.5579 0.0 379.576 High  
cufflinks 161.853 0.0 891.991 High High
cufflinks 104.066 0.0 472.479 High  
cufflinks 184.329 0.0 1090.46 High High
cufflinks 97.1854 0.0 433.042 High  
cufflinks 104.483 0.0 479.98 High  
cufflinks 8.55     High  
cufflinks 2.758       Low
cufflinks 7.587     High  
cufflinks 21.299     High High
cufflinks 28.948     High High
cufflinks 3.15       Low
cufflinks 7.593     High  
cufflinks 6.394     High  
cufflinks 8.066     High  
cufflinks 9.708     High  
cufflinks 5.75        
cufflinks 4.489        
cufflinks 5.944        
cufflinks 8.916     High  
cufflinks 3.903       Low
cufflinks 7.013     High  
cufflinks 5.738        

0 Strain