Gene : Glyma.13G271500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11088:SF31 - TRNA DIMETHYLALLYLTRANSFERASE 9 Genomic Order:  2715
Name:  ? Glyma.13G271500 Secondary Identifier:  ? PAC:30501832
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2781 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G271500 0.5kb upstream 0.5kb upstream 7251 true Chr13: 37339899-37347149 Glycine max
Glyma.13G271500 0.5kb upstream 0.5kb upstream 500 false Chr13: 37339899-37340398 Glycine max
Glyma.13G271500 0.5kb downstream 0.5kb downstream 7251 true Chr13: 37340399-37347649 Glycine max
Glyma.13G271500 0.5kb downstream 0.5kb downstream 500 false Chr13: 37347150-37347649 Glycine max
Glyma.13G271500 1.0kb upstream 1.0kb upstream 7751 true Chr13: 37339399-37347149 Glycine max
Glyma.13G271500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37339399-37340398 Glycine max
Glyma.13G271500 1.0kb downstream 1.0kb downstream 7751 true Chr13: 37340399-37348149 Glycine max
Glyma.13G271500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37347150-37348149 Glycine max
Glyma.13G271500 2.0kb upstream 2.0kb upstream 8751 true Chr13: 37338399-37347149 Glycine max
Glyma.13G271500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37338399-37340398 Glycine max
Glyma.13G271500 2.0kb downstream 2.0kb downstream 8751 true Chr13: 37340399-37349149 Glycine max
Glyma.13G271500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37347150-37349149 Glycine max
Glyma.13G271500 5.0kb upstream 5.0kb upstream 11751 true Chr13: 37335399-37347149 Glycine max
Glyma.13G271500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37335399-37340398 Glycine max
Glyma.13G271500 5.0kb downstream 5.0kb downstream 11751 true Chr13: 37340399-37352149 Glycine max
Glyma.13G271500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37347150-37352149 Glycine max
Glyma.13G271500 10.0kb upstream 10.0kb upstream 16751 true Chr13: 37330399-37347149 Glycine max
Glyma.13G271500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37330399-37340398 Glycine max
Glyma.13G271500 10.0kb downstream 10.0kb downstream 16751 true Chr13: 37340399-37357149 Glycine max
Glyma.13G271500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37347150-37357149 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302885 5265 Fabidae View MSA
124066214 5270 Rosid View MSA
123738978 5271 Pentapetalae View MSA
122792264 5272 Eudicot View MSA
122047791 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39141 0.0 7.74482    
cufflinks 2.68573 0.0 8.5661   High
cufflinks 1.27886 0.0 4.45261   Low
cufflinks 1.98981 0.0 6.603    
cufflinks 1.69636 0.0 5.73932    
cufflinks 1.45562 0.0 5.00643    
cufflinks 2.46168 0.0 7.95105   High
cufflinks 1.29247 0.0 4.49996   Low
cufflinks 1.78341 0.0 6.00103    
cufflinks 0.328        
cufflinks 0.039     Low Low
cufflinks 0.504        
cufflinks 0.631        
cufflinks 0.595        
cufflinks 0.226        
cufflinks 1.04        
cufflinks 0.11       Low
cufflinks 0.494        
cufflinks 0.788        
cufflinks 1.002        
cufflinks 0.098       Low
cufflinks 0.958        
cufflinks 1.269       High
cufflinks 0.058     Low Low
cufflinks 1.253       High
cufflinks 0.09       Low

0 Strain