Gene : Glyma.13G271700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  2717
Name:  ? Glyma.13G271700 Secondary Identifier:  ? PAC:30502476
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G271700 0.5kb upstream 0.5kb upstream 2575 true Chr13: 37374711-37377285 Glycine max
Glyma.13G271700 0.5kb upstream 0.5kb upstream 500 false Chr13: 37374711-37375210 Glycine max
Glyma.13G271700 0.5kb downstream 0.5kb downstream 2575 true Chr13: 37375211-37377785 Glycine max
Glyma.13G271700 0.5kb downstream 0.5kb downstream 500 false Chr13: 37377286-37377785 Glycine max
Glyma.13G271700 1.0kb upstream 1.0kb upstream 3075 true Chr13: 37374211-37377285 Glycine max
Glyma.13G271700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37374211-37375210 Glycine max
Glyma.13G271700 1.0kb downstream 1.0kb downstream 3075 true Chr13: 37375211-37378285 Glycine max
Glyma.13G271700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37377286-37378285 Glycine max
Glyma.13G271700 2.0kb upstream 2.0kb upstream 4075 true Chr13: 37373211-37377285 Glycine max
Glyma.13G271700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37373211-37375210 Glycine max
Glyma.13G271700 2.0kb downstream 2.0kb downstream 4075 true Chr13: 37375211-37379285 Glycine max
Glyma.13G271700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37377286-37379285 Glycine max
Glyma.13G271700 5.0kb upstream 5.0kb upstream 7075 true Chr13: 37370211-37377285 Glycine max
Glyma.13G271700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37370211-37375210 Glycine max
Glyma.13G271700 5.0kb downstream 5.0kb downstream 7075 true Chr13: 37375211-37382285 Glycine max
Glyma.13G271700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37377286-37382285 Glycine max
Glyma.13G271700 10.0kb upstream 10.0kb upstream 12075 true Chr13: 37365211-37377285 Glycine max
Glyma.13G271700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37365211-37375210 Glycine max
Glyma.13G271700 10.0kb downstream 10.0kb downstream 12075 true Chr13: 37375211-37387285 Glycine max
Glyma.13G271700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37377286-37387285 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254749 5265 Fabidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2641 0.0 27.6596    
cufflinks 6.27517 0.0 17.5539    
cufflinks 2.60899 0.0 8.19377    
cufflinks 6.92921 0.0 19.1911    
cufflinks 2.51415 0.0 7.84066    
cufflinks 3.58839 0.0 10.6763    
cufflinks 21.0173 0.0 56.3106   High
cufflinks 1.3041 0.0 4.46763   Low
cufflinks 4.28629 0.0 12.4793    
cufflinks 0.458       Low
cufflinks 0.466       Low
cufflinks 2.948        
cufflinks 2.726        
cufflinks 1.329        
cufflinks 0.466       Low
cufflinks 17.298     High High
cufflinks 1.157        
cufflinks 7.113        
cufflinks 6.476        
cufflinks 26.529     High High
cufflinks 0.459       Low
cufflinks 23.331     High High
cufflinks 23.2     High High
cufflinks 0.493       Low
cufflinks 18.443     High High
cufflinks 0.548        

0 Strain