Gene : Glyma.13G273500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  2735
Name:  ? Glyma.13G273500 Secondary Identifier:  ? PAC:30503952
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G273500 0.5kb upstream 0.5kb upstream 4767 true Chr13: 37522431-37527197 Glycine max
Glyma.13G273500 0.5kb upstream 0.5kb upstream 500 false Chr13: 37526698-37527197 Glycine max
Glyma.13G273500 0.5kb downstream 0.5kb downstream 4767 true Chr13: 37521931-37526697 Glycine max
Glyma.13G273500 0.5kb downstream 0.5kb downstream 500 false Chr13: 37521931-37522430 Glycine max
Glyma.13G273500 1.0kb upstream 1.0kb upstream 5267 true Chr13: 37522431-37527697 Glycine max
Glyma.13G273500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37526698-37527697 Glycine max
Glyma.13G273500 1.0kb downstream 1.0kb downstream 5267 true Chr13: 37521431-37526697 Glycine max
Glyma.13G273500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37521431-37522430 Glycine max
Glyma.13G273500 2.0kb upstream 2.0kb upstream 6267 true Chr13: 37522431-37528697 Glycine max
Glyma.13G273500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37526698-37528697 Glycine max
Glyma.13G273500 2.0kb downstream 2.0kb downstream 6267 true Chr13: 37520431-37526697 Glycine max
Glyma.13G273500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37520431-37522430 Glycine max
Glyma.13G273500 5.0kb upstream 5.0kb upstream 9267 true Chr13: 37522431-37531697 Glycine max
Glyma.13G273500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37526698-37531697 Glycine max
Glyma.13G273500 5.0kb downstream 5.0kb downstream 9267 true Chr13: 37517431-37526697 Glycine max
Glyma.13G273500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37517431-37522430 Glycine max
Glyma.13G273500 10.0kb upstream 10.0kb upstream 14267 true Chr13: 37522431-37536697 Glycine max
Glyma.13G273500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37526698-37536697 Glycine max
Glyma.13G273500 10.0kb downstream 10.0kb downstream 14267 true Chr13: 37512431-37526697 Glycine max
Glyma.13G273500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37512431-37522430 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312073 5265 Fabidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52193 0.0 16.9769   Low
cufflinks 8.28442 0.0 38.7652   High
cufflinks 4.46297 0.0 24.0045    
cufflinks 4.7571 0.0 27.1783    
cufflinks 4.9165 0.0 24.2511    
cufflinks 4.99505 0.0 24.758    
cufflinks 7.41803 0.0 26.4405   High
cufflinks 4.372 0.0 14.15    
cufflinks 6.201 0.0 31.6113    
cufflinks 0.553        
cufflinks 0.418       Low
cufflinks 0.68        
cufflinks 0.905        
cufflinks 1.097       High
cufflinks 0.629        
cufflinks 0.775        
cufflinks 0.305       Low
cufflinks 0.663        
cufflinks 1.414       High
cufflinks 0.718        
cufflinks 0.377       Low
cufflinks 0.767        
cufflinks 1.119       High
cufflinks 0.48        
cufflinks 0.674        
cufflinks 0.431       Low

0 Strain