Gene : Glyma.13G273600 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2736
Name:  ? Glyma.13G273600 Secondary Identifier:  ? PAC:30502371
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G273600 0.5kb upstream 0.5kb upstream 2910 true Chr13: 37528790-37531699 Glycine max
Glyma.13G273600 0.5kb upstream 0.5kb upstream 500 false Chr13: 37531200-37531699 Glycine max
Glyma.13G273600 0.5kb downstream 0.5kb downstream 2910 true Chr13: 37528290-37531199 Glycine max
Glyma.13G273600 0.5kb downstream 0.5kb downstream 500 false Chr13: 37528290-37528789 Glycine max
Glyma.13G273600 1.0kb upstream 1.0kb upstream 3410 true Chr13: 37528790-37532199 Glycine max
Glyma.13G273600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 37531200-37532199 Glycine max
Glyma.13G273600 1.0kb downstream 1.0kb downstream 3410 true Chr13: 37527790-37531199 Glycine max
Glyma.13G273600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 37527790-37528789 Glycine max
Glyma.13G273600 2.0kb upstream 2.0kb upstream 4410 true Chr13: 37528790-37533199 Glycine max
Glyma.13G273600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 37531200-37533199 Glycine max
Glyma.13G273600 2.0kb downstream 2.0kb downstream 4410 true Chr13: 37526790-37531199 Glycine max
Glyma.13G273600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 37526790-37528789 Glycine max
Glyma.13G273600 5.0kb upstream 5.0kb upstream 7410 true Chr13: 37528790-37536199 Glycine max
Glyma.13G273600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 37531200-37536199 Glycine max
Glyma.13G273600 5.0kb downstream 5.0kb downstream 7410 true Chr13: 37523790-37531199 Glycine max
Glyma.13G273600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 37523790-37528789 Glycine max
Glyma.13G273600 10.0kb upstream 10.0kb upstream 12410 true Chr13: 37528790-37541199 Glycine max
Glyma.13G273600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 37531200-37541199 Glycine max
Glyma.13G273600 10.0kb downstream 10.0kb downstream 12410 true Chr13: 37518790-37531199 Glycine max
Glyma.13G273600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 37518790-37528789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299405 5265 Fabidae View MSA
124050205 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20839 0.0 6.96308   High
cufflinks 1.42167 0.0 4.77513    
cufflinks 1.10765 0.0 3.81491    
cufflinks 1.71976 0.0 5.62542    
cufflinks 1.51846 0.0 5.03882    
cufflinks 0.508121 0.0 1.8561   Low
cufflinks 1.62011 0.0 5.32712    
cufflinks 1.19712 0.0 4.09371    
cufflinks 1.76062 0.0 5.73819    
cufflinks 1.029        
cufflinks 1.201        
cufflinks 2.006       High
cufflinks 1.021        
cufflinks 1.796       High
cufflinks 1.785       High
cufflinks 1.08        
cufflinks 0.652       Low
cufflinks 1.62       High
cufflinks 1.629       High
cufflinks 1.0        
cufflinks 1.062        
cufflinks 1.067        
cufflinks 1.245        
cufflinks 0.922        
cufflinks 1.052        
cufflinks 0.919        

0 Strain