Gene : Glyma.13G318300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11071:SF213 - PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  3183
Name:  ? Glyma.13G318300 Secondary Identifier:  ? PAC:30501467
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G318300 0.5kb upstream 0.5kb upstream 6416 true Chr13: 41269055-41275470 Glycine max
Glyma.13G318300 0.5kb upstream 0.5kb upstream 500 false Chr13: 41274971-41275470 Glycine max
Glyma.13G318300 0.5kb downstream 0.5kb downstream 6416 true Chr13: 41268555-41274970 Glycine max
Glyma.13G318300 0.5kb downstream 0.5kb downstream 500 false Chr13: 41268555-41269054 Glycine max
Glyma.13G318300 1.0kb upstream 1.0kb upstream 6916 true Chr13: 41269055-41275970 Glycine max
Glyma.13G318300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41274971-41275970 Glycine max
Glyma.13G318300 1.0kb downstream 1.0kb downstream 6916 true Chr13: 41268055-41274970 Glycine max
Glyma.13G318300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41268055-41269054 Glycine max
Glyma.13G318300 2.0kb upstream 2.0kb upstream 7916 true Chr13: 41269055-41276970 Glycine max
Glyma.13G318300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41274971-41276970 Glycine max
Glyma.13G318300 2.0kb downstream 2.0kb downstream 7916 true Chr13: 41267055-41274970 Glycine max
Glyma.13G318300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41267055-41269054 Glycine max
Glyma.13G318300 5.0kb upstream 5.0kb upstream 10916 true Chr13: 41269055-41279970 Glycine max
Glyma.13G318300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41274971-41279970 Glycine max
Glyma.13G318300 5.0kb downstream 5.0kb downstream 10916 true Chr13: 41264055-41274970 Glycine max
Glyma.13G318300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41264055-41269054 Glycine max
Glyma.13G318300 10.0kb upstream 10.0kb upstream 15916 true Chr13: 41269055-41284970 Glycine max
Glyma.13G318300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41274971-41284970 Glycine max
Glyma.13G318300 10.0kb downstream 10.0kb downstream 15916 true Chr13: 41259055-41274970 Glycine max
Glyma.13G318300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41259055-41269054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041059 5273 Angiosperm View MSA
122311322 5265 Fabidae View MSA
124067413 5270 Rosid View MSA
123745909 5271 Pentapetalae View MSA
122789860 5272 Eudicot View MSA
121344442 5274 Embryophyte View MSA
123425036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.84163 0.0 27.2435   High
cufflinks 7.16071 0.0 25.4379    
cufflinks 6.84774 0.0 24.1728    
cufflinks 6.11582 0.0 19.3114    
cufflinks 7.02997 0.0 25.4307    
cufflinks 4.57293 0.0 17.4216   Low
cufflinks 5.53704 0.0 20.5196    
cufflinks 6.39488 0.0 23.4269    
cufflinks 5.2875 0.0 19.5851    
cufflinks 1.109        
cufflinks 0.53       Low
cufflinks 1.52        
cufflinks 1.705        
cufflinks 2.062        
cufflinks 1.173        
cufflinks 1.914        
cufflinks 0.574       Low
cufflinks 1.7        
cufflinks 2.441       High
cufflinks 2.02        
cufflinks 0.66       Low
cufflinks 2.031        
cufflinks 1.952        
cufflinks 0.658       Low
cufflinks 1.97        
cufflinks 0.769       Low

0 Strain