Gene : Glyma.13G320400 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  3204
Name:  ? Glyma.13G320400 Secondary Identifier:  ? PAC:30504093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G320400 0.5kb upstream 0.5kb upstream 4784 true Chr13: 41480941-41485724 Glycine max
Glyma.13G320400 0.5kb upstream 0.5kb upstream 500 false Chr13: 41485225-41485724 Glycine max
Glyma.13G320400 0.5kb downstream 0.5kb downstream 4784 true Chr13: 41480441-41485224 Glycine max
Glyma.13G320400 0.5kb downstream 0.5kb downstream 500 false Chr13: 41480441-41480940 Glycine max
Glyma.13G320400 1.0kb upstream 1.0kb upstream 5284 true Chr13: 41480941-41486224 Glycine max
Glyma.13G320400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 41485225-41486224 Glycine max
Glyma.13G320400 1.0kb downstream 1.0kb downstream 5284 true Chr13: 41479941-41485224 Glycine max
Glyma.13G320400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 41479941-41480940 Glycine max
Glyma.13G320400 2.0kb upstream 2.0kb upstream 6284 true Chr13: 41480941-41487224 Glycine max
Glyma.13G320400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 41485225-41487224 Glycine max
Glyma.13G320400 2.0kb downstream 2.0kb downstream 6284 true Chr13: 41478941-41485224 Glycine max
Glyma.13G320400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 41478941-41480940 Glycine max
Glyma.13G320400 5.0kb upstream 5.0kb upstream 9284 true Chr13: 41480941-41490224 Glycine max
Glyma.13G320400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 41485225-41490224 Glycine max
Glyma.13G320400 5.0kb downstream 5.0kb downstream 9284 true Chr13: 41475941-41485224 Glycine max
Glyma.13G320400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 41475941-41480940 Glycine max
Glyma.13G320400 10.0kb upstream 10.0kb upstream 14284 true Chr13: 41480941-41495224 Glycine max
Glyma.13G320400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 41485225-41495224 Glycine max
Glyma.13G320400 10.0kb downstream 10.0kb downstream 14284 true Chr13: 41470941-41485224 Glycine max
Glyma.13G320400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 41470941-41480940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306491 5265 Fabidae View MSA
124061696 5270 Rosid View MSA
123736594 5271 Pentapetalae View MSA
122785807 5272 Eudicot View MSA
122045563 5273 Angiosperm View MSA
121310465 5274 Embryophyte View MSA
123347939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65692 0.0 12.9185   High
cufflinks 2.49976 0.0 7.45052    
cufflinks 4.58811 0.0 12.7162   High
cufflinks 1.25566 0.0 4.11812   Low
cufflinks 2.16855 0.0 6.60304    
cufflinks 4.03154 0.0 11.3232    
cufflinks 1.80657 0.0 5.65625    
cufflinks 3.53544 0.0 10.0745    
cufflinks 2.57662 0.0 7.64393    
cufflinks 4.23       High
cufflinks 1.375        
cufflinks 2.119        
cufflinks 2.009        
cufflinks 0.914       Low
cufflinks 11.538     High High
cufflinks 3.385        
cufflinks 1.513        
cufflinks 1.581        
cufflinks 2.055        
cufflinks 3.088        
cufflinks 1.377        
cufflinks 3.463        
cufflinks 3.013        
cufflinks 1.532        
cufflinks 3.143        
cufflinks 1.171       Low

0 Strain