Gene : Glyma.13G308900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  3089
Name:  ? Glyma.13G308900 Secondary Identifier:  ? PAC:30504995
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G308900 0.5kb upstream 0.5kb upstream 5357 true Chr13: 40456611-40461967 Glycine max
Glyma.13G308900 0.5kb upstream 0.5kb upstream 500 false Chr13: 40456611-40457110 Glycine max
Glyma.13G308900 0.5kb downstream 0.5kb downstream 5357 true Chr13: 40457111-40462467 Glycine max
Glyma.13G308900 0.5kb downstream 0.5kb downstream 500 false Chr13: 40461968-40462467 Glycine max
Glyma.13G308900 1.0kb upstream 1.0kb upstream 5857 true Chr13: 40456111-40461967 Glycine max
Glyma.13G308900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40456111-40457110 Glycine max
Glyma.13G308900 1.0kb downstream 1.0kb downstream 5857 true Chr13: 40457111-40462967 Glycine max
Glyma.13G308900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40461968-40462967 Glycine max
Glyma.13G308900 2.0kb upstream 2.0kb upstream 6857 true Chr13: 40455111-40461967 Glycine max
Glyma.13G308900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40455111-40457110 Glycine max
Glyma.13G308900 2.0kb downstream 2.0kb downstream 6857 true Chr13: 40457111-40463967 Glycine max
Glyma.13G308900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40461968-40463967 Glycine max
Glyma.13G308900 5.0kb upstream 5.0kb upstream 9857 true Chr13: 40452111-40461967 Glycine max
Glyma.13G308900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40452111-40457110 Glycine max
Glyma.13G308900 5.0kb downstream 5.0kb downstream 9857 true Chr13: 40457111-40466967 Glycine max
Glyma.13G308900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40461968-40466967 Glycine max
Glyma.13G308900 10.0kb upstream 10.0kb upstream 14857 true Chr13: 40447111-40461967 Glycine max
Glyma.13G308900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40447111-40457110 Glycine max
Glyma.13G308900 10.0kb downstream 10.0kb downstream 14857 true Chr13: 40457111-40471967 Glycine max
Glyma.13G308900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40461968-40471967 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309134 5265 Fabidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.32093 0.0 22.5543    
cufflinks 4.34157 0.0 14.7232    
cufflinks 3.54772 0.0 15.473    
cufflinks 2.01392 0.0 6.54982   Low
cufflinks 9.17626 0.0 27.6785    
cufflinks 15.3024 0.0 55.2132   High
cufflinks 7.14002 0.0 22.0969    
cufflinks 4.48256 0.0 15.0956    
cufflinks 6.00798 0.0 19.0711    
cufflinks 4.582       High
cufflinks 0.708       Low
cufflinks 2.291        
cufflinks 3.471        
cufflinks 3.182        
cufflinks 0.272       Low
cufflinks 2.475        
cufflinks 0.801        
cufflinks 7.844     High High
cufflinks 1.94        
cufflinks 2.145        
cufflinks 1.06        
cufflinks 2.432        
cufflinks 2.28        
cufflinks 1.709        
cufflinks 2.221        
cufflinks 0.609       Low

0 Strain