Gene : Glyma.13G310500 G. max Wm82.a2.v1
Defline:  (1 of 8) PF02681 - Divergent PAP2 family (DUF212) Genomic Order:  3105
Name:  ? Glyma.13G310500 Secondary Identifier:  ? PAC:30503244
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G310500 0.5kb upstream 0.5kb upstream 3553 true Chr13: 40599533-40603085 Glycine max
Glyma.13G310500 0.5kb upstream 0.5kb upstream 500 false Chr13: 40602586-40603085 Glycine max
Glyma.13G310500 0.5kb downstream 0.5kb downstream 3553 true Chr13: 40599033-40602585 Glycine max
Glyma.13G310500 0.5kb downstream 0.5kb downstream 500 false Chr13: 40599033-40599532 Glycine max
Glyma.13G310500 1.0kb upstream 1.0kb upstream 4053 true Chr13: 40599533-40603585 Glycine max
Glyma.13G310500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40602586-40603585 Glycine max
Glyma.13G310500 1.0kb downstream 1.0kb downstream 4053 true Chr13: 40598533-40602585 Glycine max
Glyma.13G310500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40598533-40599532 Glycine max
Glyma.13G310500 2.0kb upstream 2.0kb upstream 5053 true Chr13: 40599533-40604585 Glycine max
Glyma.13G310500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40602586-40604585 Glycine max
Glyma.13G310500 2.0kb downstream 2.0kb downstream 5053 true Chr13: 40597533-40602585 Glycine max
Glyma.13G310500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40597533-40599532 Glycine max
Glyma.13G310500 5.0kb upstream 5.0kb upstream 8053 true Chr13: 40599533-40607585 Glycine max
Glyma.13G310500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40602586-40607585 Glycine max
Glyma.13G310500 5.0kb downstream 5.0kb downstream 8053 true Chr13: 40594533-40602585 Glycine max
Glyma.13G310500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40594533-40599532 Glycine max
Glyma.13G310500 10.0kb upstream 10.0kb upstream 13053 true Chr13: 40599533-40612585 Glycine max
Glyma.13G310500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40602586-40612585 Glycine max
Glyma.13G310500 10.0kb downstream 10.0kb downstream 13053 true Chr13: 40589533-40602585 Glycine max
Glyma.13G310500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40589533-40599532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307761 5265 Fabidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.1862 0.0 109.935 High High
cufflinks 24.7618 0.0 66.583 High  
cufflinks 25.3922 0.0 68.2141 High  
cufflinks 24.1781 0.0 65.1032 High  
cufflinks 30.1678 0.0 80.6323 High  
cufflinks 36.1657 0.0 96.4869 High High
cufflinks 27.6691 0.0 74.1323 High  
cufflinks 23.7314 0.0 63.8829 High Low
cufflinks 30.1582 0.0 80.5838 High  
cufflinks 7.184        
cufflinks 8.628     High  
cufflinks 7.369     High  
cufflinks 5.59       Low
cufflinks 6.466        
cufflinks 7.312     High  
cufflinks 10.154     High  
cufflinks 7.473     High  
cufflinks 7.167        
cufflinks 7.04        
cufflinks 14.006     High High
cufflinks 9.452     High  
cufflinks 12.884     High High
cufflinks 6.83        
cufflinks 11.391     High High
cufflinks 11.787     High High
cufflinks 7.233     High  

0 Strain