Gene : Glyma.13G312700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN Genomic Order:  3127
Name:  ? Glyma.13G312700 Secondary Identifier:  ? PAC:30504131
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G312700 0.5kb upstream 0.5kb upstream 2660 true Chr13: 40787694-40790353 Glycine max
Glyma.13G312700 0.5kb upstream 0.5kb upstream 500 false Chr13: 40787694-40788193 Glycine max
Glyma.13G312700 0.5kb downstream 0.5kb downstream 2660 true Chr13: 40788194-40790853 Glycine max
Glyma.13G312700 0.5kb downstream 0.5kb downstream 500 false Chr13: 40790354-40790853 Glycine max
Glyma.13G312700 1.0kb upstream 1.0kb upstream 3160 true Chr13: 40787194-40790353 Glycine max
Glyma.13G312700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40787194-40788193 Glycine max
Glyma.13G312700 1.0kb downstream 1.0kb downstream 3160 true Chr13: 40788194-40791353 Glycine max
Glyma.13G312700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40790354-40791353 Glycine max
Glyma.13G312700 2.0kb upstream 2.0kb upstream 4160 true Chr13: 40786194-40790353 Glycine max
Glyma.13G312700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40786194-40788193 Glycine max
Glyma.13G312700 2.0kb downstream 2.0kb downstream 4160 true Chr13: 40788194-40792353 Glycine max
Glyma.13G312700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40790354-40792353 Glycine max
Glyma.13G312700 5.0kb upstream 5.0kb upstream 7160 true Chr13: 40783194-40790353 Glycine max
Glyma.13G312700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40783194-40788193 Glycine max
Glyma.13G312700 5.0kb downstream 5.0kb downstream 7160 true Chr13: 40788194-40795353 Glycine max
Glyma.13G312700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40790354-40795353 Glycine max
Glyma.13G312700 10.0kb upstream 10.0kb upstream 12160 true Chr13: 40778194-40790353 Glycine max
Glyma.13G312700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40778194-40788193 Glycine max
Glyma.13G312700 10.0kb downstream 10.0kb downstream 12160 true Chr13: 40788194-40800353 Glycine max
Glyma.13G312700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40790354-40800353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303042 5265 Fabidae View MSA
124070455 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.170563 0.0 0.657799 Low  
cufflinks 0.460162 0.0 1.69417    
cufflinks 0.399404 0.0 1.47996    
cufflinks 0.0169895 0.0 0.0735911 Low Low
cufflinks 3.22847 0.0 9.7263   High
cufflinks 5.05119 0.0 14.3635   High
cufflinks 0.111821 0.0 0.43867 Low  
cufflinks 0.0203862 0.0 0.0869309 Low Low
cufflinks 1.53604 0.0 5.11902    
cufflinks 0.047     Low Low
cufflinks 0.931        
cufflinks 0.223        
cufflinks 6.278       High
cufflinks 8.664     High High
cufflinks 0.009     Low Low
cufflinks 0.103        
cufflinks 3.934       High
cufflinks 0.055     Low  
cufflinks 0.215        
cufflinks 0.118        
cufflinks 1.395        
cufflinks 0.102        
cufflinks 0.108        
cufflinks 1.517        
cufflinks 0.084     Low  
cufflinks 4.671       High

0 Strain