Gene : Glyma.13G313500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  3135
Name:  ? Glyma.13G313500 Secondary Identifier:  ? PAC:30503535
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G313500 0.5kb upstream 0.5kb upstream 8154 true Chr13: 40880908-40889061 Glycine max
Glyma.13G313500 0.5kb upstream 0.5kb upstream 500 false Chr13: 40880908-40881407 Glycine max
Glyma.13G313500 0.5kb downstream 0.5kb downstream 8154 true Chr13: 40881408-40889561 Glycine max
Glyma.13G313500 0.5kb downstream 0.5kb downstream 500 false Chr13: 40889062-40889561 Glycine max
Glyma.13G313500 1.0kb upstream 1.0kb upstream 8654 true Chr13: 40880408-40889061 Glycine max
Glyma.13G313500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40880408-40881407 Glycine max
Glyma.13G313500 1.0kb downstream 1.0kb downstream 8654 true Chr13: 40881408-40890061 Glycine max
Glyma.13G313500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40889062-40890061 Glycine max
Glyma.13G313500 2.0kb upstream 2.0kb upstream 9654 true Chr13: 40879408-40889061 Glycine max
Glyma.13G313500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40879408-40881407 Glycine max
Glyma.13G313500 2.0kb downstream 2.0kb downstream 9654 true Chr13: 40881408-40891061 Glycine max
Glyma.13G313500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40889062-40891061 Glycine max
Glyma.13G313500 5.0kb upstream 5.0kb upstream 12654 true Chr13: 40876408-40889061 Glycine max
Glyma.13G313500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40876408-40881407 Glycine max
Glyma.13G313500 5.0kb downstream 5.0kb downstream 12654 true Chr13: 40881408-40894061 Glycine max
Glyma.13G313500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40889062-40894061 Glycine max
Glyma.13G313500 10.0kb upstream 10.0kb upstream 17654 true Chr13: 40871408-40889061 Glycine max
Glyma.13G313500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40871408-40881407 Glycine max
Glyma.13G313500 10.0kb downstream 10.0kb downstream 17654 true Chr13: 40881408-40899061 Glycine max
Glyma.13G313500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40889062-40899061 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309247 5265 Fabidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01974 0.0 5.87755   Low
cufflinks 6.6184 0.0 17.6704    
cufflinks 2.62011 0.0 7.3737   Low
cufflinks 8.30303 0.0 22.1665   High
cufflinks 5.99883 0.0 16.0468    
cufflinks 5.31981 0.0 14.2768    
cufflinks 3.2432 0.0 8.98144    
cufflinks 7.23178 0.0 19.2939    
cufflinks 4.66934 0.0 12.5943    
cufflinks 5.839       High
cufflinks 0.542       Low
cufflinks 2.384        
cufflinks 4.709        
cufflinks 3.383        
cufflinks 0.348       Low
cufflinks 3.955        
cufflinks 1.638        
cufflinks 3.792        
cufflinks 4.737        
cufflinks 2.751        
cufflinks 1.369        
cufflinks 3.297        
cufflinks 3.204        
cufflinks 0.645       Low
cufflinks 3.273        
cufflinks 1.707        

0 Strain