Gene : Glyma.13G300200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10769 - 40S RIBOSOMAL PROTEIN S28 Genomic Order:  3002
Name:  ? Glyma.13G300200 Secondary Identifier:  ? PAC:30500434
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G300200 0.5kb upstream 0.5kb upstream 2124 true Chr13: 39831266-39833389 Glycine max
Glyma.13G300200 0.5kb upstream 0.5kb upstream 500 false Chr13: 39832890-39833389 Glycine max
Glyma.13G300200 0.5kb downstream 0.5kb downstream 2124 true Chr13: 39830766-39832889 Glycine max
Glyma.13G300200 0.5kb downstream 0.5kb downstream 500 false Chr13: 39830766-39831265 Glycine max
Glyma.13G300200 1.0kb upstream 1.0kb upstream 2624 true Chr13: 39831266-39833889 Glycine max
Glyma.13G300200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39832890-39833889 Glycine max
Glyma.13G300200 1.0kb downstream 1.0kb downstream 2624 true Chr13: 39830266-39832889 Glycine max
Glyma.13G300200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39830266-39831265 Glycine max
Glyma.13G300200 2.0kb upstream 2.0kb upstream 3624 true Chr13: 39831266-39834889 Glycine max
Glyma.13G300200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39832890-39834889 Glycine max
Glyma.13G300200 2.0kb downstream 2.0kb downstream 3624 true Chr13: 39829266-39832889 Glycine max
Glyma.13G300200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39829266-39831265 Glycine max
Glyma.13G300200 5.0kb upstream 5.0kb upstream 6624 true Chr13: 39831266-39837889 Glycine max
Glyma.13G300200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39832890-39837889 Glycine max
Glyma.13G300200 5.0kb downstream 5.0kb downstream 6624 true Chr13: 39826266-39832889 Glycine max
Glyma.13G300200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39826266-39831265 Glycine max
Glyma.13G300200 10.0kb upstream 10.0kb upstream 11624 true Chr13: 39831266-39842889 Glycine max
Glyma.13G300200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39832890-39842889 Glycine max
Glyma.13G300200 10.0kb downstream 10.0kb downstream 11624 true Chr13: 39821266-39832889 Glycine max
Glyma.13G300200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39821266-39831265 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122309148 5265 Fabidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.9634 0.0 74.5312 High Low
cufflinks 58.3828 0.0 155.772 High  
cufflinks 34.735 0.0 94.0514 High  
cufflinks 30.7611 0.0 84.0043 High  
cufflinks 62.8529 0.0 167.687 High  
cufflinks 48.9835 0.0 131.036 High  
cufflinks 131.679 0.0 361.82 High High
cufflinks 42.9918 0.0 115.352 High  
cufflinks 50.0346 0.0 133.742 High  
cufflinks 20.066     High  
cufflinks 9.565     High Low
cufflinks 21.197     High  
cufflinks 26.385     High  
cufflinks 43.909     High High
cufflinks 10.872     High Low
cufflinks 21.458     High  
cufflinks 9.806     High Low
cufflinks 25.84     High  
cufflinks 23.645     High  
cufflinks 16.823     High  
cufflinks 11.712     High  
cufflinks 17.406     High  
cufflinks 21.985     High  
cufflinks 9.991     High Low
cufflinks 22.383     High  
cufflinks 13.2     High  

0 Strain