Gene : Glyma.13G300400 G. max Wm82.a2.v1
Genomic Order:  3004 Name:  ? Glyma.13G300400
Secondary Identifier:  ? PAC:30502820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G300400 0.5kb upstream 0.5kb upstream 1387 true Chr13: 39839369-39840755 Glycine max
Glyma.13G300400 0.5kb upstream 0.5kb upstream 500 false Chr13: 39839369-39839868 Glycine max
Glyma.13G300400 0.5kb downstream 0.5kb downstream 1387 true Chr13: 39839869-39841255 Glycine max
Glyma.13G300400 0.5kb downstream 0.5kb downstream 500 false Chr13: 39840756-39841255 Glycine max
Glyma.13G300400 1.0kb upstream 1.0kb upstream 1887 true Chr13: 39838869-39840755 Glycine max
Glyma.13G300400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39838869-39839868 Glycine max
Glyma.13G300400 1.0kb downstream 1.0kb downstream 1887 true Chr13: 39839869-39841755 Glycine max
Glyma.13G300400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39840756-39841755 Glycine max
Glyma.13G300400 2.0kb upstream 2.0kb upstream 2887 true Chr13: 39837869-39840755 Glycine max
Glyma.13G300400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39837869-39839868 Glycine max
Glyma.13G300400 2.0kb downstream 2.0kb downstream 2887 true Chr13: 39839869-39842755 Glycine max
Glyma.13G300400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39840756-39842755 Glycine max
Glyma.13G300400 5.0kb upstream 5.0kb upstream 5887 true Chr13: 39834869-39840755 Glycine max
Glyma.13G300400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39834869-39839868 Glycine max
Glyma.13G300400 5.0kb downstream 5.0kb downstream 5887 true Chr13: 39839869-39845755 Glycine max
Glyma.13G300400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39840756-39845755 Glycine max
Glyma.13G300400 10.0kb upstream 10.0kb upstream 10887 true Chr13: 39829869-39840755 Glycine max
Glyma.13G300400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39829869-39839868 Glycine max
Glyma.13G300400 10.0kb downstream 10.0kb downstream 10887 true Chr13: 39839869-39850755 Glycine max
Glyma.13G300400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39840756-39850755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246055 5265 Fabidae Singleton cluster - no MSA
123990073 5270 Rosid Singleton cluster - no MSA
123565124 5271 Pentapetalae Singleton cluster - no MSA
122599893 5272 Eudicot Singleton cluster - no MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257486 0.0 1.02491   Low
cufflinks 9.87374 0.0 30.2018   High
cufflinks 1.22557 0.0 4.57277    
cufflinks 3.27202 0.0 11.4738    
cufflinks 0.209935 0.0 0.840775 Low Low
cufflinks 1.66984 0.0 6.12647    
cufflinks 0.854877 0.0 3.24099    
cufflinks 0.573702 0.0 2.21337    
cufflinks 0.318574 0.0 1.25679    
cufflinks 0.259        
cufflinks 0.087        
cufflinks 2.14        
cufflinks 0.14        
cufflinks 0.179        
cufflinks 0.023     Low Low
cufflinks 5.501       High
cufflinks 0.052     Low  
cufflinks 5.222       High
cufflinks 1.383        
cufflinks 5.112       High
cufflinks 0.024     Low Low
cufflinks 5.835       High
cufflinks 4.544       High
cufflinks 0.023     Low Low
cufflinks 3.104        
cufflinks 0.089        

0 Strain